Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1945

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
2,305,646	+				+1.7
2,305,647	-				-0.3
2,305,687	+				+0.7
2,305,688	-				+0.8
2,305,688	-				+1.2
2,305,688	-				-2.6
2,306,556	+				-0.6
2,306,570	+				-2.0
2,306,570	+				-2.6
2,306,580	+				+2.0
2,306,580	+				+1.2
2,306,580	+				-0.9
2,306,654	+				-2.1
2,306,657	+				-1.9
2,306,690	+		Pf6N2E2_1945	0.13	-2.8
2,306,690	+		Pf6N2E2_1945	0.13	-1.1
2,306,690	+		Pf6N2E2_1945	0.13	+0.9
2,306,690	+		Pf6N2E2_1945	0.13	-1.1
2,306,690	+		Pf6N2E2_1945	0.13	+1.1
2,306,690	+		Pf6N2E2_1945	0.13	+2.8
2,306,691	-		Pf6N2E2_1945	0.13	-1.3
2,306,691	-		Pf6N2E2_1945	0.13	+3.4
2,306,691	-		Pf6N2E2_1945	0.13	+1.0
2,306,691	-		Pf6N2E2_1945	0.13	+2.1
2,306,691	-		Pf6N2E2_1945	0.13	+1.2
2,306,691	-		Pf6N2E2_1945	0.13	-2.9
2,306,691	-		Pf6N2E2_1945	0.13	+1.5
2,306,691	-		Pf6N2E2_1945	0.13	-0.6
2,306,691	-		Pf6N2E2_1945	0.13	+2.1
2,306,748	-		Pf6N2E2_1945	0.20	-2.5
2,306,941	-		Pf6N2E2_1945	0.46	-2.5
2,306,972	+				+0.7
2,307,113	+		Pf6N2E2_1945	0.69	+3.4
2,307,114	-		Pf6N2E2_1945	0.69	-1.0
2,307,114	-		Pf6N2E2_1945	0.69	+2.4
2,307,114	-		Pf6N2E2_1945	0.69	-1.1
2,307,114	-		Pf6N2E2_1945	0.69	-0.4
2,307,114	-		Pf6N2E2_1945	0.69	-1.1
2,307,114	-		Pf6N2E2_1945	0.69	+0.4
2,307,169	+		Pf6N2E2_1945	0.76	-0.1
2,307,182	+		Pf6N2E2_1945	0.78	-0.4
2,307,183	-		Pf6N2E2_1945	0.78	-0.0
2,307,183	-		Pf6N2E2_1945	0.78	+1.8
2,307,183	-		Pf6N2E2_1945	0.78	-0.9
2,307,183	-		Pf6N2E2_1945	0.78	-1.6
2,307,183	-		Pf6N2E2_1945	0.78	+0.5
2,307,296	+				+1.1
2,307,337	+				-0.8
2,307,337	+				-0.0
2,307,338	-				-0.3
2,307,338	-				+1.2
2,307,343	-				+0.7
2,307,343	-				-0.2
2,307,683	+				+1.2
2,307,707	+		Pf6N2E2_1947	0.10	-2.2
2,307,708	-		Pf6N2E2_1947	0.10	-0.3
2,307,887	+		Pf6N2E2_1947	0.25	-1.5
2,307,887	+		Pf6N2E2_1947	0.25	+0.9
2,307,887	+		Pf6N2E2_1947	0.25	-0.3
2,307,887	+		Pf6N2E2_1947	0.25	-1.9
2,307,888	-		Pf6N2E2_1947	0.25	-1.9
2,307,888	-		Pf6N2E2_1947	0.25	+0.7
2,308,248	+		Pf6N2E2_1947	0.56	-1.8