Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1893

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
2,242,628	-		Pf6N2E2_1891	0.73	-1.7
2,242,628	-		Pf6N2E2_1891	0.73	-0.6
2,242,740	+		Pf6N2E2_1891	0.81	+1.8
2,242,761	-		Pf6N2E2_1891	0.83	-1.1
2,242,865	-				+1.7
2,242,865	-				-0.7
2,242,918	+				-1.6
2,242,919	-				-1.4
2,242,985	-				-0.1
2,243,109	+		Pf6N2E2_1892	0.24	+0.3
2,243,109	+		Pf6N2E2_1892	0.24	+0.1
2,243,109	+		Pf6N2E2_1892	0.24	+0.3
2,243,110	-		Pf6N2E2_1892	0.24	+1.0
2,243,171	+		Pf6N2E2_1892	0.34	+2.4
2,243,172	-		Pf6N2E2_1892	0.35	+0.1
2,243,172	-		Pf6N2E2_1892	0.35	+1.3
2,243,175	+		Pf6N2E2_1892	0.35	+0.5
2,243,175	+		Pf6N2E2_1892	0.35	-0.9
2,243,175	+		Pf6N2E2_1892	0.35	+0.8
2,243,175	+		Pf6N2E2_1892	0.35	+0.9
2,243,176	-		Pf6N2E2_1892	0.35	-0.3
2,243,176	-		Pf6N2E2_1892	0.35	+0.3
2,243,176	-		Pf6N2E2_1892	0.35	-1.2
2,243,176	-		Pf6N2E2_1892	0.35	-2.3
2,243,176	-		Pf6N2E2_1892	0.35	+0.9
2,243,288	+		Pf6N2E2_1892	0.55	-0.3
2,243,288	+		Pf6N2E2_1892	0.55	+0.9
2,243,288	+		Pf6N2E2_1892	0.55	+1.2
2,243,289	-		Pf6N2E2_1892	0.55	-2.9
2,243,289	-		Pf6N2E2_1892	0.55	+0.7
2,243,289	-		Pf6N2E2_1892	0.55	-2.3
2,243,298	-		Pf6N2E2_1892	0.56	+1.2
2,243,318	+		Pf6N2E2_1892	0.60	+2.1
2,243,319	-		Pf6N2E2_1892	0.60	-1.9
2,243,375	+		Pf6N2E2_1892	0.70	+0.1
2,243,375	+		Pf6N2E2_1892	0.70	-1.1
2,243,375	+		Pf6N2E2_1892	0.70	+0.2
2,243,375	+		Pf6N2E2_1892	0.70	+0.3
2,243,376	-		Pf6N2E2_1892	0.70	-1.1
2,243,376	-		Pf6N2E2_1892	0.70	+1.4
2,243,376	-		Pf6N2E2_1892	0.70	-0.3
2,243,391	-		Pf6N2E2_1892	0.73	+1.5
2,243,457	+		Pf6N2E2_1892	0.84	-2.6
2,243,457	+		Pf6N2E2_1892	0.84	+1.7
2,243,457	+		Pf6N2E2_1892	0.84	-0.4
2,243,458	-		Pf6N2E2_1892	0.84	-1.7
2,243,458	-		Pf6N2E2_1892	0.84	-1.4
2,243,458	-		Pf6N2E2_1892	0.84	-0.3
2,243,458	-		Pf6N2E2_1892	0.84	-2.7
2,243,458	-		Pf6N2E2_1892	0.84	+0.6
2,243,458	-		Pf6N2E2_1892	0.84	+0.1
2,243,458	-		Pf6N2E2_1892	0.84	+0.0
2,243,458	-		Pf6N2E2_1892	0.84	-2.6
2,243,458	-		Pf6N2E2_1892	0.84	-0.3
2,243,458	-		Pf6N2E2_1892	0.84	-1.4
2,243,458	-		Pf6N2E2_1892	0.84	-2.1
2,243,484	-		Pf6N2E2_1892	0.89	+0.7
2,243,486	-		Pf6N2E2_1892	0.89	+0.7
2,243,521	+				+2.3
2,243,521	+				+1.7
2,243,521	+				-0.6
2,243,521	+				-1.1
2,243,521	+				+1.2
2,243,522	-				+0.1
2,243,522	-				-1.4
2,243,522	-				-1.1
2,243,535	+				-2.0
2,243,535	+				-1.7
2,243,535	+				-0.2
2,243,536	-				-1.9
2,243,536	-				+1.3
2,243,536	-				+1.4
2,243,536	-				-3.3
2,243,562	-				-0.1
2,243,562	-				+1.8
2,243,596	-				+1.3
2,243,596	-				+0.4
2,243,655	-				-1.3
2,243,655	-				-1.9
2,243,655	-				-1.9
2,243,753	-		Pf6N2E2_1893	0.29	-2.2
2,243,968	+		Pf6N2E2_1893	0.73	-2.4
2,243,969	-		Pf6N2E2_1893	0.74	-1.9
2,243,969	-		Pf6N2E2_1893	0.74	-0.9
2,243,969	-		Pf6N2E2_1893	0.74	-1.3
2,243,971	+		Pf6N2E2_1893	0.74	+0.7
2,244,194	-				-2.0
2,244,194	-				-1.5
2,244,194	-				-2.9
2,244,287	+				-0.3
2,244,288	-				+0.7
2,244,288	-				+2.7
2,244,288	-				-2.0
2,244,356	-				+3.1
2,244,356	-				-0.8
2,244,416	-				+1.1
2,244,470	-				-1.3
2,244,500	+				-1.3
2,244,500	+				-0.6
2,244,501	-				+3.4
2,244,501	-				-2.5
2,244,549	+				-0.9
2,244,565	-				-0.1
2,244,568	+				+1.6
2,244,568	+				-0.1
2,244,569	-				+0.1
2,244,613	-				+2.1
2,244,613	-				-1.4
2,244,702	+				-2.6
2,244,703	-				-2.6
2,244,703	-				+2.4
2,244,710	-				+0.5
2,244,721	-				-0.4
2,244,749	+				-0.6
2,244,749	+				-0.9
2,244,749	+				-1.1
2,244,749	+				+1.2
2,244,749	+				-2.6
2,244,763	+				+1.7
2,244,763	+				+0.6
2,244,807	+				-1.0
2,244,807	+				-1.7
2,244,807	+				-1.7
2,244,807	+				+1.4
2,244,808	-				+0.9
2,244,808	-				+1.4
2,244,810	+				-0.2
2,244,861	+		Pf6N2E2_1894	0.47	-2.0
2,244,895	+		Pf6N2E2_1894	0.73	+0.3
2,244,900	+		Pf6N2E2_1894	0.77	+2.2
2,244,900	+		Pf6N2E2_1894	0.77	+2.1
2,244,907	+		Pf6N2E2_1894	0.82	-1.1
2,244,907	+		Pf6N2E2_1894	0.82	+1.0
2,244,908	-		Pf6N2E2_1894	0.83	-1.0
2,244,908	-		Pf6N2E2_1894	0.83	+2.2
2,244,908	-		Pf6N2E2_1894	0.83	+0.1
2,244,918	+				-1.0
2,244,919	-				+0.1
2,244,919	-				+1.3
2,244,953	+				+0.3
2,244,953	+				+0.8
2,244,963	+				-2.0
2,244,963	+				-2.9
2,244,964	-				+0.1
2,244,967	+				+1.1
2,244,967	+				-1.9
2,245,032	+				+0.1
2,245,032	+				+0.3
2,245,033	-				+0.7
2,245,033	-				+0.8
2,245,058	+				+1.0
2,245,058	+				+0.9
2,245,059	-				-0.5
2,245,092	-				-0.0