Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1663

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
1,969,222	+		Pf6N2E2_1662	0.30	-3.3
1,969,223	-		Pf6N2E2_1662	0.30	+0.5
1,969,223	-		Pf6N2E2_1662	0.30	+0.6
1,969,223	-		Pf6N2E2_1662	0.30	-0.5
1,969,409	+		Pf6N2E2_1662	0.52	-0.8
1,969,410	-		Pf6N2E2_1662	0.52	-1.5
1,969,410	-		Pf6N2E2_1662	0.52	-0.2
1,969,521	+		Pf6N2E2_1662	0.65	+0.6
1,969,522	-		Pf6N2E2_1662	0.65	+0.9
1,969,810	+				+1.3
1,969,810	+				-0.6
1,969,855	+				+1.7
1,969,921	-				+0.8
1,969,921	-				-1.9
1,969,993	-		Pf6N2E2_1663	0.19	-0.9
1,970,274	+		Pf6N2E2_1663	0.57	-2.2
1,970,274	+		Pf6N2E2_1663	0.57	-0.1
1,970,333	+		Pf6N2E2_1663	0.65	+1.8
1,970,333	+		Pf6N2E2_1663	0.65	-2.6
1,970,333	+		Pf6N2E2_1663	0.65	-3.1
1,970,334	-		Pf6N2E2_1663	0.65	+0.8
1,970,334	-		Pf6N2E2_1663	0.65	+0.9
1,970,334	-		Pf6N2E2_1663	0.65	+0.9
1,970,353	-		Pf6N2E2_1663	0.68	-1.3
1,970,353	-		Pf6N2E2_1663	0.68	-1.3
1,970,567	+				-1.7
1,970,582	+				-0.3
1,970,583	-				-3.3
1,970,699	-				+1.3
1,970,699	-				-0.9
1,970,699	-				-0.5
1,970,699	-				-0.5
1,970,702	+				+2.2
1,970,702	+				-0.1
1,970,702	+				-0.6
1,970,702	+				+0.7
1,970,702	+				+0.7
1,970,702	+				-1.9
1,970,702	+				+0.4
1,970,702	+				+0.3
1,970,702	+				+2.3
1,970,703	-				-1.4
1,970,703	-				+1.7
1,970,703	-				-0.5
1,971,137	+		Pf6N2E2_1664	0.40	-2.0
1,971,427	+		Pf6N2E2_1664	0.61	+1.7
1,971,509	+		Pf6N2E2_1664	0.67	+1.1
1,971,510	-		Pf6N2E2_1664	0.67	-0.1
1,971,518	+		Pf6N2E2_1664	0.67	+0.7
1,971,519	-		Pf6N2E2_1664	0.67	+0.4
1,971,519	-		Pf6N2E2_1664	0.67	-1.0
1,971,578	+		Pf6N2E2_1664	0.72	+1.3
1,971,578	+		Pf6N2E2_1664	0.72	+0.7
1,971,578	+		Pf6N2E2_1664	0.72	-1.1
1,971,578	+		Pf6N2E2_1664	0.72	-0.3
1,971,579	-		Pf6N2E2_1664	0.72	-1.3
1,971,579	-		Pf6N2E2_1664	0.72	+0.5
1,971,579	-		Pf6N2E2_1664	0.72	+0.7