Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1231

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
1,441,250	+		Pf6N2E2_1229	0.81	+1.7
1,441,250	+		Pf6N2E2_1229	0.81	+0.5
1,441,250	+		Pf6N2E2_1229	0.81	+0.7
1,441,250	+		Pf6N2E2_1229	0.81	-0.3
1,441,251	-		Pf6N2E2_1229	0.81	+1.5
1,441,332	-		Pf6N2E2_1229	0.84	-0.7
1,441,332	-		Pf6N2E2_1229	0.84	-3.0
1,441,475	+		Pf6N2E2_1229	0.89	+1.6
1,441,475	+		Pf6N2E2_1229	0.89	+0.5
1,441,475	+		Pf6N2E2_1229	0.89	-1.5
1,441,475	+		Pf6N2E2_1229	0.89	-1.6
1,441,475	+		Pf6N2E2_1229	0.89	+0.5
1,441,475	+		Pf6N2E2_1229	0.89	-0.5
1,441,475	+		Pf6N2E2_1229	0.89	+0.5
1,441,476	-		Pf6N2E2_1229	0.89	-0.1
1,441,487	+		Pf6N2E2_1229	0.89	+0.0
1,441,614	-				-0.5
1,441,710	-				+0.7
1,441,710	-				-1.3
1,441,841	+				-1.8
1,441,841	+				+2.6
1,441,842	-				+0.8
1,441,842	-				+1.3
1,441,842	-				+0.5
1,441,842	-				-0.0
1,441,842	-				+1.3
1,441,842	-				-3.2
1,441,842	-				-0.0
1,442,151	+				+0.7
1,442,152	-				-1.7
1,442,152	-				-2.4
1,442,154	+				-1.3
1,442,182	-				+1.4
1,442,220	+		Pf6N2E2_1231	0.11	-0.1
1,442,329	-		Pf6N2E2_1231	0.19	+0.5
1,442,435	-		Pf6N2E2_1231	0.26	-2.1
1,442,482	-		Pf6N2E2_1231	0.30	-0.1
1,442,482	-		Pf6N2E2_1231	0.30	-0.3
1,442,482	-		Pf6N2E2_1231	0.30	-0.5
1,442,482	-		Pf6N2E2_1231	0.30	+0.0
1,442,536	-		Pf6N2E2_1231	0.34	-2.0
1,442,536	-		Pf6N2E2_1231	0.34	-1.2
1,442,539	+		Pf6N2E2_1231	0.34	+0.8
1,442,539	+		Pf6N2E2_1231	0.34	+0.9
1,442,540	-		Pf6N2E2_1231	0.34	+1.5
1,442,540	-		Pf6N2E2_1231	0.34	+1.3
1,442,540	-		Pf6N2E2_1231	0.34	+1.4
1,442,540	-		Pf6N2E2_1231	0.34	-1.1
1,442,859	+		Pf6N2E2_1231	0.58	-2.3
1,442,893	+		Pf6N2E2_1231	0.60	+0.5
1,443,003	+		Pf6N2E2_1231	0.69	-0.5
1,443,004	-		Pf6N2E2_1231	0.69	-2.1
1,443,108	+		Pf6N2E2_1231	0.76	-1.3
1,443,109	-		Pf6N2E2_1231	0.76	+1.3
1,443,147	+		Pf6N2E2_1231	0.79	-2.0
1,443,156	+		Pf6N2E2_1231	0.80	+0.8
1,443,156	+		Pf6N2E2_1231	0.80	-0.1
1,443,157	-		Pf6N2E2_1231	0.80	-0.5
1,443,157	-		Pf6N2E2_1231	0.80	-2.3
1,443,199	-		Pf6N2E2_1231	0.83	-0.3
1,443,231	+		Pf6N2E2_1231	0.85	+0.8
1,443,232	-		Pf6N2E2_1231	0.85	-0.8
1,443,237	+		Pf6N2E2_1231	0.86	-1.7
1,443,443	+				-2.4
1,443,443	+				-0.1
1,443,444	-				+1.0
1,443,494	+				+2.1
1,443,495	-				-0.1
1,443,495	-				-0.7
1,443,611	+		Pf6N2E2_1232	0.13	+0.9
1,443,611	+		Pf6N2E2_1232	0.13	+1.0
1,443,611	+		Pf6N2E2_1232	0.13	+0.3
1,443,611	+		Pf6N2E2_1232	0.13	+0.8
1,443,611	+		Pf6N2E2_1232	0.13	+4.3
1,443,612	-		Pf6N2E2_1232	0.13	+0.6
1,443,612	-		Pf6N2E2_1232	0.13	-0.1
1,443,612	-		Pf6N2E2_1232	0.13	-0.8
1,443,612	-		Pf6N2E2_1232	0.13	+2.2
1,443,612	-		Pf6N2E2_1232	0.13	-1.8
1,443,612	-		Pf6N2E2_1232	0.13	-0.1
1,443,614	+		Pf6N2E2_1232	0.13	+1.5
1,443,992	+		Pf6N2E2_1232	0.42	-1.5
1,444,136	+		Pf6N2E2_1232	0.53	-0.2
1,444,136	+		Pf6N2E2_1232	0.53	+1.5
1,444,136	+		Pf6N2E2_1232	0.53	+2.2
1,444,137	-		Pf6N2E2_1232	0.53	-0.5
1,444,137	-		Pf6N2E2_1232	0.53	+0.9
1,444,137	-		Pf6N2E2_1232	0.53	+1.1
1,444,381	+		Pf6N2E2_1232	0.71	+0.9
1,444,381	+		Pf6N2E2_1232	0.71	-2.2
1,444,381	+		Pf6N2E2_1232	0.71	+1.6
1,444,382	-		Pf6N2E2_1232	0.71	+0.5
1,444,382	-		Pf6N2E2_1232	0.71	-1.1