Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1181

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
1,382,445	-		Pf6N2E2_1180	0.35	+1.5
1,382,515	+		Pf6N2E2_1180	0.40	-1.0
1,382,516	-		Pf6N2E2_1180	0.40	-2.2
1,382,687	-		Pf6N2E2_1180	0.54	+0.6
1,382,841	+		Pf6N2E2_1180	0.67	-1.8
1,383,066	+		Pf6N2E2_1180	0.85	-1.7
1,383,066	+		Pf6N2E2_1180	0.85	+0.7
1,383,067	-		Pf6N2E2_1180	0.85	+1.2
1,383,068	+		Pf6N2E2_1180	0.85	-3.1
1,383,068	+		Pf6N2E2_1180	0.85	-3.3
1,383,069	-		Pf6N2E2_1180	0.85	-1.3
1,383,069	-		Pf6N2E2_1180	0.85	+1.0
1,383,069	-		Pf6N2E2_1180	0.85	+0.6
1,383,069	-		Pf6N2E2_1180	0.85	+0.5
1,383,069	-		Pf6N2E2_1180	0.85	-0.4
1,383,087	-		Pf6N2E2_1180	0.86	-1.3
1,383,267	+				+0.7
1,383,268	-				-1.0
1,383,268	-				+1.5
1,383,268	-				-3.3
1,383,268	-				-1.3
1,383,269	+				+2.2
1,383,269	+				-0.8
1,383,269	+				-1.3
1,383,270	-				+0.3
1,383,296	-				-2.4
1,383,542	+		Pf6N2E2_1181	0.27	+1.2
1,383,705	-		Pf6N2E2_1181	0.48	+2.5
1,383,808	-		Pf6N2E2_1181	0.62	+2.0
1,383,842	+		Pf6N2E2_1181	0.66	-1.3
1,383,842	+		Pf6N2E2_1181	0.66	+1.6
1,383,843	-		Pf6N2E2_1181	0.67	-1.7
1,383,843	-		Pf6N2E2_1181	0.67	-0.2
1,383,883	+		Pf6N2E2_1181	0.72	+2.0
1,383,883	+		Pf6N2E2_1181	0.72	-0.9
1,383,884	-		Pf6N2E2_1181	0.72	+0.1
1,383,951	+		Pf6N2E2_1181	0.81	-0.8
1,383,952	-		Pf6N2E2_1181	0.81	+1.2
1,384,029	+				+0.7
1,384,241	+		Pf6N2E2_1182	0.10	+0.9
1,384,354	+		Pf6N2E2_1182	0.23	-0.6
1,384,354	+		Pf6N2E2_1182	0.23	-1.3
1,384,355	-		Pf6N2E2_1182	0.23	-3.1
1,384,466	-		Pf6N2E2_1182	0.36	-1.7