Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1060

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
1,236,443	+		Pf6N2E2_1059	0.59	+0.3
1,236,443	+		Pf6N2E2_1059	0.59	-3.0
1,236,443	+		Pf6N2E2_1059	0.59	-2.0
1,236,444	-		Pf6N2E2_1059	0.59	-1.6
1,236,465	-		Pf6N2E2_1059	0.61	-3.3
1,236,572	+		Pf6N2E2_1059	0.67	-2.0
1,236,573	-		Pf6N2E2_1059	0.67	+1.1
1,236,573	-		Pf6N2E2_1059	0.67	+0.7
1,236,573	-		Pf6N2E2_1059	0.67	+0.3
1,236,913	+		Pf6N2E2_1059	0.88	-3.0
1,237,012	+				-1.3
1,237,012	+				+1.1
1,237,012	+				+3.0
1,237,012	+				+1.4
1,237,013	-				-1.7
1,237,013	-				+1.4
1,237,016	+				+0.5
1,237,016	+				+3.5
1,237,016	+				+1.4
1,237,016	+				-1.9
1,237,016	+				-1.5
1,237,016	+				-1.9
1,237,017	-				-1.9
1,237,017	-				-0.5
1,237,017	-				+0.4
1,237,017	-				+0.5
1,237,017	-				-3.3
1,237,025	+				-0.0
1,237,026	-				+1.6
1,237,099	+				-2.5
1,237,115	+				+1.3
1,237,116	-				-0.8
1,237,116	-				+0.5
1,237,221	-				-3.3
1,237,344	+				+1.5
1,237,456	+		Pf6N2E2_1060	0.24	+1.8
1,237,638	+		Pf6N2E2_1060	0.50	+1.7
1,237,638	+		Pf6N2E2_1060	0.50	-0.6
1,237,639	-		Pf6N2E2_1060	0.50	+0.2
1,237,639	-		Pf6N2E2_1060	0.50	-1.5
1,237,675	+		Pf6N2E2_1060	0.55	+1.7
1,237,675	+		Pf6N2E2_1060	0.55	-1.4
1,237,676	-		Pf6N2E2_1060	0.55	+1.1
1,237,676	-		Pf6N2E2_1060	0.55	-0.7
1,237,676	-		Pf6N2E2_1060	0.55	-1.5
1,237,676	-		Pf6N2E2_1060	0.55	+2.0
1,237,676	-		Pf6N2E2_1060	0.55	+1.2
1,237,716	+		Pf6N2E2_1060	0.61	+0.8
1,237,717	-		Pf6N2E2_1060	0.61	-0.2
1,237,717	-		Pf6N2E2_1060	0.61	-0.1
1,237,717	-		Pf6N2E2_1060	0.61	-2.4
1,237,717	-		Pf6N2E2_1060	0.61	+1.2
1,237,717	-		Pf6N2E2_1060	0.61	-0.9
1,237,717	-		Pf6N2E2_1060	0.61	-2.2
1,237,717	-		Pf6N2E2_1060	0.61	-0.8
1,237,717	-		Pf6N2E2_1060	0.61	+1.5
1,237,786	+		Pf6N2E2_1060	0.71	-0.0
1,237,786	+		Pf6N2E2_1060	0.71	+0.5
1,237,786	+		Pf6N2E2_1060	0.71	-1.3
1,237,786	+		Pf6N2E2_1060	0.71	-0.9
1,237,786	+		Pf6N2E2_1060	0.71	+1.2
1,237,786	+		Pf6N2E2_1060	0.71	-2.5
1,237,786	+		Pf6N2E2_1060	0.71	-0.2
1,237,786	+		Pf6N2E2_1060	0.71	+0.6
1,237,787	-		Pf6N2E2_1060	0.71	+1.8
1,237,787	-		Pf6N2E2_1060	0.71	-3.7
1,237,787	-		Pf6N2E2_1060	0.71	+1.2
1,237,787	-		Pf6N2E2_1060	0.71	-0.5
1,237,787	-		Pf6N2E2_1060	0.71	+1.0
1,237,787	-		Pf6N2E2_1060	0.71	-1.0
1,237,787	-		Pf6N2E2_1060	0.71	+2.4
1,237,787	-		Pf6N2E2_1060	0.71	+0.5
1,237,787	-		Pf6N2E2_1060	0.71	+0.7
1,237,787	-		Pf6N2E2_1060	0.71	-1.3
1,237,787	-		Pf6N2E2_1060	0.71	-1.6
1,237,900	+		Pf6N2E2_1060	0.88	+0.8
1,237,991	+		Pf6N2E2_1061	0.23	-1.5
1,238,031	+		Pf6N2E2_1061	0.54	-1.5
1,238,131	+				-2.2
1,238,186	+				-0.4
1,238,186	+				-1.8
1,238,187	-				+0.3
1,238,259	+				-0.0
1,238,260	-				+2.8
1,238,390	-				-1.3
1,238,390	-				+0.6
1,238,405	+				+1.1
1,238,405	+				-1.6
1,238,411	+				-0.3
1,238,411	+				+1.8
1,238,411	+				-1.5
1,238,411	+				-0.8
1,238,411	+				-2.9
1,238,412	-				-0.0
1,238,824	+		Pf6N2E2_1062	0.24	-0.0
1,238,824	+		Pf6N2E2_1062	0.24	-1.9
1,238,825	-		Pf6N2E2_1062	0.24	-2.4
1,238,825	-		Pf6N2E2_1062	0.24	-2.3