Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_106

Experiment: Bile salts 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bile salts 0.0125 M
150,627	-		Pf6N2E2_104	0.89	+0.4
150,667	+				-2.1
150,667	+				-0.7
150,667	+				-3.1
150,701	-				+1.2
150,712	+				+1.5
150,712	+				-1.3
150,879	+		Pf6N2E2_105	0.16	-0.5
151,167	+		Pf6N2E2_105	0.49	-0.4
151,167	+		Pf6N2E2_105	0.49	-0.8
151,168	-		Pf6N2E2_105	0.49	+1.1
151,168	-		Pf6N2E2_105	0.49	+0.6
151,173	+		Pf6N2E2_105	0.49	-1.7
151,173	+		Pf6N2E2_105	0.49	-2.6
151,174	-		Pf6N2E2_105	0.50	+0.5
151,174	-		Pf6N2E2_105	0.50	+0.5
151,174	-		Pf6N2E2_105	0.50	-1.6
151,258	-		Pf6N2E2_105	0.59	-2.1
151,287	+		Pf6N2E2_105	0.63	-1.1
151,288	-		Pf6N2E2_105	0.63	+0.6
151,288	-		Pf6N2E2_105	0.63	+0.5
151,290	+		Pf6N2E2_105	0.63	+0.3
151,290	+				+0.2
151,290	+		Pf6N2E2_105	0.63	+0.9
151,291	-		Pf6N2E2_105	0.63	+1.1
151,413	+		Pf6N2E2_105	0.77	-0.3
151,414	-		Pf6N2E2_105	0.77	+0.7
151,540	-				+2.1
151,540	-				+0.5
151,540	-				-1.3
151,540	-				-1.3
151,575	+				+0.0
151,575	+				-1.3
151,654	+				-2.8
151,655	-				+1.2
151,655	-				+1.1
151,655	-				-2.2
151,681	+				-3.0
151,695	+				-2.0
151,695	+				+0.8
151,696	-				+0.8
151,768	+		Pf6N2E2_106	0.18	-3.2
151,768	+		Pf6N2E2_106	0.18	-0.2
151,768	+		Pf6N2E2_106	0.18	+1.2
151,769	-		Pf6N2E2_106	0.18	+0.1
151,798	+		Pf6N2E2_106	0.22	+0.7
151,823	-		Pf6N2E2_106	0.25	-0.2
151,825	+		Pf6N2E2_106	0.25	-1.1
151,826	-		Pf6N2E2_106	0.26	-2.2
151,826	-		Pf6N2E2_106	0.26	+1.1
151,984	+		Pf6N2E2_106	0.45	-2.4
151,984	+		Pf6N2E2_106	0.45	-0.4
151,985	-		Pf6N2E2_106	0.45	+1.7
151,985	-		Pf6N2E2_106	0.45	-0.5
152,117	-		Pf6N2E2_106	0.62	-1.2
152,703	-				+0.7
152,731	+				+2.1
152,752	+				+1.3
152,753	-				-1.3
152,753	-				+0.2
152,753	-				+0.2
152,753	-				+1.4
152,782	+				+1.0
152,783	-				-1.3
152,783	-				+1.2
152,893	+				+0.5
152,893	+				-2.2
153,127	+		Pf6N2E2_108	0.21	-1.6
153,127	+		Pf6N2E2_108	0.21	-2.2
153,127	+		Pf6N2E2_108	0.21	-0.5
153,127	+		Pf6N2E2_108	0.21	+0.4
153,127	+		Pf6N2E2_108	0.21	+1.2
153,127	+		Pf6N2E2_108	0.21	+2.0
153,127	+		Pf6N2E2_108	0.21	+2.0
153,128	-		Pf6N2E2_108	0.22	-1.1
153,128	-		Pf6N2E2_108	0.22	+0.4
153,128	-		Pf6N2E2_108	0.22	+3.2
153,128	-		Pf6N2E2_108	0.22	-2.9
153,128	-		Pf6N2E2_108	0.22	-2.6
153,128	-		Pf6N2E2_108	0.22	-1.8
153,128	-		Pf6N2E2_108	0.22	-0.4
153,131	+		Pf6N2E2_108	0.22	+1.0
153,131	+		Pf6N2E2_108	0.22	+0.5
153,131	+		Pf6N2E2_108	0.22	-1.2
153,131	+		Pf6N2E2_108	0.22	+2.3
153,132	-		Pf6N2E2_108	0.22	-2.2
153,132	-		Pf6N2E2_108	0.22	+2.5
153,132	-		Pf6N2E2_108	0.22	+1.5
153,132	-		Pf6N2E2_108	0.22	-2.0
153,132	-		Pf6N2E2_108	0.22	-1.4
153,132	-		Pf6N2E2_108	0.22	-0.3
153,132	-		Pf6N2E2_108	0.22	+2.7
153,132	-		Pf6N2E2_108	0.22	+0.2
153,132	-		Pf6N2E2_108	0.22	-0.7
153,132	-		Pf6N2E2_108	0.22	-1.3
153,268	+		Pf6N2E2_108	0.30	-2.4
153,278	-		Pf6N2E2_108	0.30	+2.0
153,336	-		Pf6N2E2_108	0.33	-3.9
153,395	+		Pf6N2E2_108	0.37	+0.8
153,395	+		Pf6N2E2_108	0.37	-0.9
153,396	-		Pf6N2E2_108	0.37	-0.9
153,396	-		Pf6N2E2_108	0.37	+0.9
153,396	-		Pf6N2E2_108	0.37	-0.8