Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS22285

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
5,095,328	-				+0.3
5,095,468	-				+0.2
5,095,578	+		HSERO_RS22280	0.20	-0.1
5,095,605	-		HSERO_RS22280	0.23	-0.1
5,095,605	-		HSERO_RS22280	0.23	-3.2
5,095,668	+		HSERO_RS22280	0.30	+0.6
5,095,732	-		HSERO_RS22280	0.37	+0.9
5,095,773	+		HSERO_RS22280	0.42	+0.8
5,095,886	+		HSERO_RS22280	0.54	+0.0
5,095,887	+		HSERO_RS22280	0.54	+0.2
5,095,913	-		HSERO_RS22280	0.57	-0.5
5,096,047	+		HSERO_RS22280	0.71	+0.7
5,096,182	+		HSERO_RS22280	0.86	+0.5
5,096,187	+		HSERO_RS22280	0.86	-0.9
5,096,195	-		HSERO_RS22280	0.87	+0.3
5,096,334	-				-0.1
5,096,677	+		HSERO_RS22285	0.53	+1.0
5,096,849	+		HSERO_RS22285	0.78	+0.5
5,096,857	-		HSERO_RS22285	0.80	-0.7
5,097,234	-				-0.5
5,097,402	+				+1.5
5,097,520	+		HSERO_RS22290	0.38	+0.2
5,097,714	-		HSERO_RS22290	0.60	+0.1
5,097,846	+		HSERO_RS22290	0.75	+0.3
5,097,902	+		HSERO_RS22290	0.82	+0.1
5,097,939	-		HSERO_RS22290	0.86	-0.5