Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS22175

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
5,070,994	+		HSERO_RS22170	0.25	+0.4
5,071,130	-		HSERO_RS22170	0.36	+0.3
5,071,249	+		HSERO_RS22170	0.45	+0.2
5,071,318	-		HSERO_RS22170	0.50	-0.0
5,071,385	+		HSERO_RS22170	0.55	+0.2
5,071,393	-		HSERO_RS22170	0.56	+0.3
5,071,451	+		HSERO_RS22170	0.60	-1.1
5,071,582	-		HSERO_RS22170	0.71	-0.9
5,071,598	+		HSERO_RS22170	0.72	-0.1
5,071,706	+		HSERO_RS22170	0.80	+0.6
5,071,786	-		HSERO_RS22170	0.86	-0.3
5,071,786	-		HSERO_RS22170	0.86	-0.8
5,071,864	-				-0.1
5,072,007	+		HSERO_RS22175	0.15	+0.8
5,072,239	-				+0.7
5,072,281	+				-0.2
5,072,326	+				+1.4
5,072,326	+				+0.4
5,072,342	-				-0.8
5,072,401	+				-0.3
5,072,487	-				+0.0
5,072,591	+				+0.1
5,072,650	+				-0.3
5,072,658	-				+0.2
5,072,749	+		HSERO_RS22180	0.11	-0.3
5,072,762	-		HSERO_RS22180	0.13	-0.3
5,073,156	+		HSERO_RS22180	0.56	+0.6