Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS22075 and HSERO_RS22080 are separated by 11 nucleotides HSERO_RS22080 and HSERO_RS22085 are separated by 164 nucleotides HSERO_RS22085 and HSERO_RS22090 overlap by 8 nucleotides
HSERO_RS22075: HSERO_RS22075 - phosphohexose mutase, at 5,046,546 to 5,047,268
_RS22075
HSERO_RS22080: HSERO_RS22080 - phosphoheptose isomerase, at 5,047,280 to 5,047,852
_RS22080
HSERO_RS22085: HSERO_RS22085 - D,D-heptose 1,7-bisphosphate phosphatase, at 5,048,017 to 5,048,607
_RS22085
HSERO_RS22090: HSERO_RS22090 - hypothetical protein, at 5,048,600 to 5,049,766
_RS22090
Position (kb) 5048
5049 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5047.249 kb on + strand at 5047.257 kb on - strand at 5047.257 kb on - strand at 5047.272 kb on + strand at 5047.446 kb on + strand, within HSERO_RS22080 at 5047.561 kb on - strand, within HSERO_RS22080 at 5047.640 kb on - strand, within HSERO_RS22080 at 5047.646 kb on + strand, within HSERO_RS22080 at 5047.675 kb on - strand, within HSERO_RS22080 at 5047.745 kb on - strand, within HSERO_RS22080 at 5047.805 kb on + strand at 5047.814 kb on - strand at 5047.824 kb on + strand at 5047.919 kb on + strand at 5047.976 kb on + strand at 5047.982 kb on + strand at 5047.984 kb on - strand at 5048.027 kb on - strand at 5048.027 kb on - strand at 5048.445 kb on + strand, within HSERO_RS22085 at 5048.453 kb on - strand, within HSERO_RS22085 at 5048.616 kb on - strand at 5048.689 kb on + strand at 5048.842 kb on + strand, within HSERO_RS22090 at 5049.087 kb on - strand, within HSERO_RS22090 at 5049.151 kb on - strand, within HSERO_RS22090 at 5049.160 kb on + strand at 5049.232 kb on + strand, within HSERO_RS22090 at 5049.298 kb on - strand, within HSERO_RS22090 at 5049.475 kb on + strand, within HSERO_RS22090 at 5049.512 kb on + strand, within HSERO_RS22090
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 5,047,249 + +0.5 5,047,257 - +0.9 5,047,257 - -0.1 5,047,272 + +0.2 5,047,446 + HSERO_RS22080 0.29 -1.2 5,047,561 - HSERO_RS22080 0.49 -0.4 5,047,640 - HSERO_RS22080 0.63 +0.5 5,047,646 + HSERO_RS22080 0.64 +0.1 5,047,675 - HSERO_RS22080 0.69 -0.2 5,047,745 - HSERO_RS22080 0.81 -0.1 5,047,805 + +2.3 5,047,814 - -1.1 5,047,824 + +0.3 5,047,919 + -2.0 5,047,976 + +0.2 5,047,982 + +0.2 5,047,984 - +0.1 5,048,027 - -0.4 5,048,027 - -0.2 5,048,445 + HSERO_RS22085 0.72 +0.6 5,048,453 - HSERO_RS22085 0.74 +0.4 5,048,616 - +0.3 5,048,689 + -1.0 5,048,842 + HSERO_RS22090 0.21 -0.6 5,049,087 - HSERO_RS22090 0.42 +0.3 5,049,151 - HSERO_RS22090 0.47 +0.5 5,049,160 + +1.3 5,049,232 + HSERO_RS22090 0.54 +0.1 5,049,298 - HSERO_RS22090 0.60 -0.5 5,049,475 + HSERO_RS22090 0.75 -0.2 5,049,512 + HSERO_RS22090 0.78 +0.6
Or see this region's nucleotide sequence