Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS21110

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
4,827,816	-		HSERO_RS21100	0.74	+0.9
4,827,923	-		HSERO_RS21100	0.84	+0.6
4,828,019	-				+0.7
4,828,130	+				+0.8
4,828,428	-		HSERO_RS21105	0.42	+1.9
4,828,777	+				-0.4
4,828,777	+				+1.0
4,828,777	+				-0.3
4,828,785	-				+0.1
4,828,785	-				-0.0
4,828,794	-				-1.3
4,829,268	-		HSERO_RS21110	0.24	-1.0
4,829,366	-		HSERO_RS21110	0.29	+0.4
4,829,439	-		HSERO_RS21110	0.33	+0.0
4,829,518	-		HSERO_RS21110	0.37	+0.4
4,829,589	-		HSERO_RS21110	0.40	+0.7
4,829,649	-		HSERO_RS21110	0.43	+0.5
4,829,692	+		HSERO_RS21110	0.46	-0.1
4,829,953	+		HSERO_RS21110	0.59	+0.8
4,830,125	-		HSERO_RS21110	0.68	+2.7
4,830,185	-		HSERO_RS21110	0.71	+0.8
4,830,185	-		HSERO_RS21110	0.71	+1.5
4,830,256	-		HSERO_RS21110	0.75	+0.9
4,830,515	+		HSERO_RS21110	0.88	-0.2
4,830,522	-		HSERO_RS21110	0.88	+1.3
4,830,523	-		HSERO_RS21110	0.88	-0.0
4,830,597	+				-1.2
4,830,703	+				-0.9
4,830,792	-				+0.3
4,831,012	-		HSERO_RS21115	0.22	-0.3
4,831,043	+		HSERO_RS21115	0.26	+1.9
4,831,102	-		HSERO_RS21115	0.34	-0.1
4,831,317	-		HSERO_RS21115	0.62	-0.3
4,831,573	-				-0.7
4,831,622	+				-0.3
4,831,650	-				+0.1
4,831,688	+		HSERO_RS21120	0.13	+0.8
4,831,703	+		HSERO_RS21120	0.15	+0.0