Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS21015

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
4,808,147	+		HSERO_RS21010	0.16	+0.4
4,808,265	-		HSERO_RS21010	0.27	-0.1
4,808,272	-		HSERO_RS21010	0.27	-1.1
4,808,342	-		HSERO_RS21010	0.33	+0.6
4,808,378	+		HSERO_RS21010	0.36	-0.9
4,808,430	-		HSERO_RS21010	0.41	-0.3
4,808,564	-		HSERO_RS21010	0.52	+0.9
4,808,574	-		HSERO_RS21010	0.53	+0.9
4,808,640	-		HSERO_RS21010	0.59	+0.8
4,808,760	-		HSERO_RS21010	0.69	+0.2
4,808,775	+		HSERO_RS21010	0.71	-0.8
4,808,940	+		HSERO_RS21010	0.85	+1.1
4,808,983	-		HSERO_RS21010	0.89	+0.1
4,809,114	+				-0.1
4,809,355	-		HSERO_RS21015	0.40	+2.1
4,809,435	-		HSERO_RS21015	0.53	+0.8
4,809,596	-		HSERO_RS21015	0.79	+0.1
4,809,611	-		HSERO_RS21015	0.82	+0.1
4,809,667	+				+0.4
4,809,722	-				-0.2
4,809,722	-				-0.1
4,809,737	+				+0.3
4,809,826	-		HSERO_RS21020	0.14	-0.4
4,809,883	-		HSERO_RS21020	0.21	-0.2
4,809,930	+		HSERO_RS21020	0.27	-0.7
4,809,968	+		HSERO_RS21020	0.32	-0.8
4,809,996	+		HSERO_RS21020	0.36	+0.7
4,810,099	-		HSERO_RS21020	0.49	+0.2
4,810,229	+		HSERO_RS21020	0.66	-0.6
4,810,410	-				-0.5
4,810,481	-				+0.5
4,810,571	-		HSERO_RS21025	0.13	-0.8
4,810,601	+		HSERO_RS21025	0.17	+0.5
4,810,610	+		HSERO_RS21025	0.18	+1.4
4,810,664	-		HSERO_RS21025	0.26	+0.3
4,810,701	+		HSERO_RS21025	0.31	+1.3