Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS20975

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
4,798,434	-		HSERO_RS20970	0.24	-0.4
4,798,482	+		HSERO_RS20970	0.28	+0.3
4,798,513	-		HSERO_RS20970	0.31	+0.5
4,798,527	+		HSERO_RS20970	0.32	+0.6
4,798,573	+		HSERO_RS20970	0.35	-0.2
4,798,581	-		HSERO_RS20970	0.36	+0.4
4,798,591	-		HSERO_RS20970	0.37	+0.1
4,798,779	-		HSERO_RS20970	0.52	+1.2
4,799,117	+		HSERO_RS20970	0.78	+0.0
4,799,153	+		HSERO_RS20970	0.81	-0.0
4,799,243	+		HSERO_RS20970	0.88	+0.5
4,799,330	+				+0.7
4,799,338	-				-0.3
4,799,591	+				+1.3
4,799,649	-		HSERO_RS20975	0.24	+0.1
4,799,657	+		HSERO_RS20975	0.24	+0.6
4,799,657	+		HSERO_RS20975	0.24	+0.9
4,799,721	+		HSERO_RS20975	0.30	+0.4
4,799,754	+		HSERO_RS20975	0.33	+1.1
4,800,078	-		HSERO_RS20975	0.64	-1.4
4,800,093	-		HSERO_RS20975	0.65	-0.2
4,800,111	-		HSERO_RS20975	0.67	+0.9
4,800,205	-		HSERO_RS20975	0.75	+0.5
4,800,293	+		HSERO_RS20975	0.84	+1.3
4,800,326	-		HSERO_RS20975	0.87	+0.2
4,800,440	-				+0.3
4,800,509	-				+0.6
4,800,509	-				-0.3
4,800,606	-		HSERO_RS20980	0.11	-1.7
4,800,634	+		HSERO_RS20980	0.14	-0.1
4,800,855	+		HSERO_RS20980	0.35	+1.0
4,800,920	-		HSERO_RS20980	0.41	+0.1
4,801,125	-		HSERO_RS20980	0.60	-0.4
4,801,330	-		HSERO_RS20980	0.80	-0.1
4,801,381	-		HSERO_RS20980	0.85	+0.2