Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS20025

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
4,594,327	-				+0.8
4,594,489	+		HSERO_RS20020	0.24	+0.5
4,594,498	+		HSERO_RS20020	0.26	+0.7
4,594,756	-		HSERO_RS20020	0.59	-1.0
4,594,782	-		HSERO_RS20020	0.62	+0.3
4,594,838	-		HSERO_RS20020	0.69	+0.0
4,595,057	+				-0.0
4,595,317	+				-0.2
4,595,413	-				-0.5
4,595,605	+		HSERO_RS20025	0.21	+0.8
4,595,616	+		HSERO_RS20025	0.22	-1.1
4,596,034	+		HSERO_RS20025	0.44	+1.4
4,596,045	+		HSERO_RS20025	0.45	+1.0
4,596,060	-		HSERO_RS20025	0.46	+0.8
4,596,234	-		HSERO_RS20025	0.55	+0.5
4,596,250	-		HSERO_RS20025	0.56	+0.2
4,596,308	+		HSERO_RS20025	0.59	-0.2
4,596,316	-		HSERO_RS20025	0.59	+0.1
4,596,563	+		HSERO_RS20025	0.73	+1.1
4,596,608	+		HSERO_RS20025	0.75	+0.6
4,596,837	+		HSERO_RS20025	0.87	+1.3
4,596,968	-				-0.1
4,597,000	+				+0.1
4,597,003	-				-1.2
4,597,054	+				-0.5
4,597,075	-				+1.6
4,597,119	-				-0.0
4,597,121	+				-0.7
4,597,178	-				+0.2
4,597,245	-		HSERO_RS20030	0.13	-0.1
4,597,437	-		HSERO_RS20030	0.28	+0.3
4,597,517	+		HSERO_RS20030	0.34	-1.4
4,597,866	+				-0.1
4,597,912	+		HSERO_RS20030	0.66	-0.6