Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS18740

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
4,300,771	-		HSERO_RS18735	0.48	-3.0
4,300,783	+		HSERO_RS18735	0.49	-0.6
4,300,813	-		HSERO_RS18735	0.51	-0.4
4,301,079	+		HSERO_RS18735	0.69	-0.1
4,301,087	-		HSERO_RS18735	0.69	-0.7
4,301,156	+		HSERO_RS18735	0.74	+0.0
4,301,174	-		HSERO_RS18735	0.75	-0.3
4,301,269	-		HSERO_RS18735	0.82	+0.3
4,301,319	-		HSERO_RS18735	0.85	-0.9
4,301,529	-				+0.2
4,301,702	+				+0.6
4,301,928	-		HSERO_RS18740	0.47	+1.3
4,301,941	-		HSERO_RS18740	0.50	+0.2
4,302,334	-		HSERO_RS18745	0.10	-0.6
4,302,344	-		HSERO_RS18745	0.11	+0.8
4,302,443	+		HSERO_RS18745	0.17	-1.6
4,302,690	-				-0.2
4,302,869	-		HSERO_RS18745	0.45	-0.1
4,302,961	+		HSERO_RS18745	0.51	+1.0
4,302,986	+		HSERO_RS18745	0.52	-0.2
4,302,992	+		HSERO_RS18745	0.53	+0.8