Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS18665 and HSERO_RS18670 overlap by 4 nucleotides HSERO_RS18670 and HSERO_RS18675 are separated by 42 nucleotides HSERO_RS18675 and HSERO_RS18680 overlap by 4 nucleotides
HSERO_RS18665: HSERO_RS18665 - diguanylate cyclase, at 4,286,685 to 4,287,407
_RS18665
HSERO_RS18670: HSERO_RS18670 - Fe-S oxidoreductase, at 4,287,404 to 4,287,796
_RS18670
HSERO_RS18675: HSERO_RS18675 - hypothetical protein, at 4,287,839 to 4,288,402
_RS18675
HSERO_RS18680: HSERO_RS18680 - hypothetical protein, at 4,288,399 to 4,289,667
_RS18680
Position (kb) 4287
4288
4289 Strain fitness (log2 ratio) -2
-1
0
1
2 at 4286.909 kb on - strand, within HSERO_RS18665 at 4286.924 kb on + strand, within HSERO_RS18665 at 4287.076 kb on + strand, within HSERO_RS18665 at 4287.125 kb on - strand, within HSERO_RS18665 at 4287.169 kb on + strand, within HSERO_RS18665 at 4287.418 kb on - strand at 4287.599 kb on + strand, within HSERO_RS18670 at 4287.622 kb on + strand, within HSERO_RS18670 at 4288.066 kb on + strand, within HSERO_RS18675 at 4288.091 kb on + strand, within HSERO_RS18675 at 4288.210 kb on - strand, within HSERO_RS18675 at 4288.402 kb on + strand at 4288.409 kb on + strand at 4288.599 kb on - strand, within HSERO_RS18680 at 4288.637 kb on + strand, within HSERO_RS18680 at 4288.665 kb on + strand, within HSERO_RS18680 at 4288.673 kb on - strand, within HSERO_RS18680 at 4288.708 kb on + strand, within HSERO_RS18680 at 4288.837 kb on - strand, within HSERO_RS18680 at 4288.862 kb on + strand, within HSERO_RS18680 at 4288.943 kb on + strand, within HSERO_RS18680 at 4289.050 kb on - strand, within HSERO_RS18680 at 4289.155 kb on + strand, within HSERO_RS18680 at 4289.172 kb on + strand, within HSERO_RS18680 at 4289.270 kb on + strand, within HSERO_RS18680 at 4289.270 kb on + strand, within HSERO_RS18680 at 4289.313 kb on + strand, within HSERO_RS18680
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 4,286,909 - HSERO_RS18665 0.31 -0.3 4,286,924 + HSERO_RS18665 0.33 -0.3 4,287,076 + HSERO_RS18665 0.54 +0.6 4,287,125 - HSERO_RS18665 0.61 -1.9 4,287,169 + HSERO_RS18665 0.67 -0.1 4,287,418 - -0.2 4,287,599 + HSERO_RS18670 0.50 -0.0 4,287,622 + HSERO_RS18670 0.55 -0.2 4,288,066 + HSERO_RS18675 0.40 +0.5 4,288,091 + HSERO_RS18675 0.45 +1.8 4,288,210 - HSERO_RS18675 0.66 +0.8 4,288,402 + -0.3 4,288,409 + -0.5 4,288,599 - HSERO_RS18680 0.16 -0.3 4,288,637 + HSERO_RS18680 0.19 -0.2 4,288,665 + HSERO_RS18680 0.21 -0.3 4,288,673 - HSERO_RS18680 0.22 -0.1 4,288,708 + HSERO_RS18680 0.24 -0.6 4,288,837 - HSERO_RS18680 0.35 +0.3 4,288,862 + HSERO_RS18680 0.36 -0.6 4,288,943 + HSERO_RS18680 0.43 +0.7 4,289,050 - HSERO_RS18680 0.51 -0.1 4,289,155 + HSERO_RS18680 0.60 -0.2 4,289,172 + HSERO_RS18680 0.61 -1.3 4,289,270 + HSERO_RS18680 0.69 -0.2 4,289,270 + HSERO_RS18680 0.69 +0.4 4,289,313 + HSERO_RS18680 0.72 +0.3
Or see this region's nucleotide sequence