Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS18600

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
4,265,725	+		HSERO_RS18595	0.59	-0.0
4,265,733	-		HSERO_RS18595	0.60	-0.9
4,265,740	+		HSERO_RS18595	0.60	+0.1
4,265,798	+		HSERO_RS18595	0.64	-1.4
4,265,865	-		HSERO_RS18595	0.68	-0.3
4,265,991	-		HSERO_RS18595	0.76	-0.1
4,266,001	-		HSERO_RS18595	0.77	-0.3
4,266,019	-		HSERO_RS18595	0.78	-0.4
4,266,120	-		HSERO_RS18595	0.85	-0.1
4,266,139	+		HSERO_RS18595	0.86	-0.2
4,266,267	-				-1.5
4,266,630	-				-1.0
4,266,914	-		HSERO_RS18600	0.50	+1.4
4,267,137	+		HSERO_RS18600	0.86	+0.6
4,267,241	+				+0.6
4,267,241	+				+0.2
4,267,244	-				+0.1
4,267,355	+				-0.4
4,267,495	-		HSERO_RS18605	0.12	-0.3
4,267,503	+		HSERO_RS18605	0.12	+0.5
4,267,573	+		HSERO_RS18605	0.16	-0.1
4,267,964	-		HSERO_RS18605	0.41	-0.3
4,267,975	+		HSERO_RS18605	0.41	+0.4
4,268,036	-		HSERO_RS18605	0.45	-0.9
4,268,078	+		HSERO_RS18605	0.48	-0.4
4,268,137	-		HSERO_RS18605	0.51	+0.2
4,268,179	+		HSERO_RS18605	0.54	+0.6
4,268,187	-		HSERO_RS18605	0.54	-0.2