Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS18025

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
4,141,859	-		HSERO_RS18020	0.69	-0.2
4,141,885	-		HSERO_RS18020	0.70	-0.4
4,141,940	-		HSERO_RS18020	0.73	-0.7
4,142,011	+		HSERO_RS18020	0.76	-0.2
4,142,019	-		HSERO_RS18020	0.76	+0.8
4,142,156	+		HSERO_RS18020	0.83	-3.6
4,142,171	+		HSERO_RS18020	0.83	+0.5
4,142,179	-		HSERO_RS18020	0.84	-0.9
4,142,179	-		HSERO_RS18020	0.84	-0.7
4,142,211	+		HSERO_RS18020	0.85	+2.0
4,142,302	-		HSERO_RS18020	0.89	+0.2
4,142,302	-		HSERO_RS18020	0.89	+0.9
4,142,304	+		HSERO_RS18020	0.89	+0.2
4,142,323	-				+0.3
4,142,414	-				+0.9
4,142,479	+				-0.7
4,142,484	+				+1.0
4,142,487	-				+0.7
4,142,492	-				+1.7
4,142,492	-				+0.6
4,142,492	-				+0.0
4,142,685	-				+0.7
4,142,689	-				+0.2
4,142,740	+				-0.2
4,142,756	+				+1.5
4,142,983	+				-0.6
4,143,168	-		HSERO_RS18025	0.21	+1.0
4,143,266	+		HSERO_RS18025	0.27	+1.4
4,143,527	+		HSERO_RS18025	0.44	+0.6
4,143,788	+		HSERO_RS18025	0.60	+0.9
4,143,788	+		HSERO_RS18025	0.60	+0.4
4,143,935	+				+2.4
4,143,940	+		HSERO_RS18025	0.70	-0.3
4,144,191	-		HSERO_RS18025	0.85	+0.1
4,144,246	+		HSERO_RS18025	0.89	+0.3
4,144,467	-				-0.8
4,144,835	-				-0.3
4,144,864	+				+0.1
4,144,871	-				-0.6
4,144,872	-				+2.0
4,145,078	-		HSERO_RS18035	0.26	-2.9
4,145,133	-		HSERO_RS18035	0.36	+0.8
4,145,271	+		HSERO_RS18035	0.61	-1.7
4,145,276	+		HSERO_RS18035	0.62	-1.1
4,145,291	+		HSERO_RS18035	0.64	-0.2