Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS17930 and HSERO_RS17935 overlap by 4 nucleotides HSERO_RS17935 and HSERO_RS17940 are separated by 84 nucleotides HSERO_RS17940 and HSERO_RS17945 overlap by 4 nucleotides HSERO_RS17945 and HSERO_RS17950 are separated by 5 nucleotides
HSERO_RS17930: HSERO_RS17930 - acyltransferase, at 4,119,138 to 4,120,214
_RS17930
HSERO_RS17935: HSERO_RS17935 - beta-lactamase, at 4,120,211 to 4,121,029
_RS17935
HSERO_RS17940: HSERO_RS17940 - hypothetical protein, at 4,121,114 to 4,121,509
_RS17940
HSERO_RS17945: HSERO_RS17945 - hypothetical protein, at 4,121,506 to 4,122,366
_RS17945
HSERO_RS17950: HSERO_RS17950 - hypothetical protein, at 4,122,372 to 4,122,797
_RS17950
Position (kb) 4121
4122 Strain fitness (log2 ratio) -2
-1
0
1 at 4120.178 kb on + strand at 4120.297 kb on + strand, within HSERO_RS17935 at 4120.310 kb on + strand, within HSERO_RS17935 at 4120.323 kb on - strand, within HSERO_RS17935 at 4120.323 kb on - strand, within HSERO_RS17935 at 4120.560 kb on + strand, within HSERO_RS17935 at 4120.565 kb on + strand, within HSERO_RS17935 at 4120.571 kb on - strand, within HSERO_RS17935 at 4120.703 kb on - strand, within HSERO_RS17935 at 4120.727 kb on - strand at 4120.727 kb on - strand, within HSERO_RS17935 at 4120.759 kb on - strand, within HSERO_RS17935 at 4120.775 kb on - strand at 4120.967 kb on - strand at 4121.022 kb on - strand at 4121.142 kb on - strand at 4121.316 kb on - strand, within HSERO_RS17940 at 4121.440 kb on + strand, within HSERO_RS17940 at 4121.704 kb on + strand, within HSERO_RS17945 at 4121.712 kb on - strand, within HSERO_RS17945 at 4121.712 kb on - strand, within HSERO_RS17945 at 4121.712 kb on - strand, within HSERO_RS17945 at 4121.754 kb on + strand, within HSERO_RS17945 at 4121.895 kb on + strand, within HSERO_RS17945 at 4121.969 kb on + strand, within HSERO_RS17945 at 4121.974 kb on + strand, within HSERO_RS17945 at 4121.974 kb on + strand, within HSERO_RS17945 at 4121.982 kb on - strand, within HSERO_RS17945 at 4121.982 kb on - strand, within HSERO_RS17945 at 4122.027 kb on + strand, within HSERO_RS17945 at 4122.035 kb on - strand, within HSERO_RS17945 at 4122.066 kb on - strand, within HSERO_RS17945 at 4122.066 kb on - strand, within HSERO_RS17945 at 4122.066 kb on - strand, within HSERO_RS17945 at 4122.111 kb on - strand, within HSERO_RS17945 at 4122.185 kb on + strand, within HSERO_RS17945 at 4122.190 kb on + strand, within HSERO_RS17945 at 4122.285 kb on + strand at 4122.470 kb on + strand, within HSERO_RS17950
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 4,120,178 + -0.4 4,120,297 + HSERO_RS17935 0.11 +0.0 4,120,310 + HSERO_RS17935 0.12 +0.2 4,120,323 - HSERO_RS17935 0.14 +0.7 4,120,323 - HSERO_RS17935 0.14 +0.6 4,120,560 + HSERO_RS17935 0.43 +0.2 4,120,565 + HSERO_RS17935 0.43 +0.0 4,120,571 - HSERO_RS17935 0.44 -1.1 4,120,703 - HSERO_RS17935 0.60 +0.2 4,120,727 - -0.2 4,120,727 - HSERO_RS17935 0.63 -0.4 4,120,759 - HSERO_RS17935 0.67 +0.4 4,120,775 - +0.8 4,120,967 - -0.2 4,121,022 - -0.8 4,121,142 - +0.9 4,121,316 - HSERO_RS17940 0.51 +1.0 4,121,440 + HSERO_RS17940 0.82 +0.2 4,121,704 + HSERO_RS17945 0.23 +0.6 4,121,712 - HSERO_RS17945 0.24 -0.2 4,121,712 - HSERO_RS17945 0.24 -2.0 4,121,712 - HSERO_RS17945 0.24 -1.7 4,121,754 + HSERO_RS17945 0.29 -0.5 4,121,895 + HSERO_RS17945 0.45 -0.2 4,121,969 + HSERO_RS17945 0.54 -0.6 4,121,974 + HSERO_RS17945 0.54 -0.8 4,121,974 + HSERO_RS17945 0.54 -0.5 4,121,982 - HSERO_RS17945 0.55 -1.2 4,121,982 - HSERO_RS17945 0.55 +0.3 4,122,027 + HSERO_RS17945 0.61 +0.4 4,122,035 - HSERO_RS17945 0.61 +0.9 4,122,066 - HSERO_RS17945 0.65 +0.8 4,122,066 - HSERO_RS17945 0.65 -0.8 4,122,066 - HSERO_RS17945 0.65 -0.4 4,122,111 - HSERO_RS17945 0.70 +0.7 4,122,185 + HSERO_RS17945 0.79 -0.2 4,122,190 + HSERO_RS17945 0.79 +0.2 4,122,285 + -0.1 4,122,470 + HSERO_RS17950 0.23 -0.3
Or see this region's nucleotide sequence