Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS16210 and HSERO_RS16215 overlap by 4 nucleotides HSERO_RS16215 and HSERO_RS16220 are separated by 12 nucleotides HSERO_RS16220 and HSERO_RS16225 are separated by 11 nucleotides
HSERO_RS16210: HSERO_RS16210 - hypothetical protein, at 3,697,022 to 3,697,873
_RS16210
HSERO_RS16215: HSERO_RS16215 - hypothetical protein, at 3,697,870 to 3,698,625
_RS16215
HSERO_RS16220: HSERO_RS16220 - hypothetical protein, at 3,698,638 to 3,699,108
_RS16220
HSERO_RS16225: HSERO_RS16225 - methyltransferase, at 3,699,120 to 3,700,439
_RS16225
Position (kb) 3698
3699
3700 Strain fitness (log2 ratio) -1
0
1 at 3697.806 kb on - strand at 3698.156 kb on + strand, within HSERO_RS16215 at 3698.247 kb on + strand, within HSERO_RS16215 at 3698.407 kb on + strand at 3698.512 kb on + strand, within HSERO_RS16215 at 3698.514 kb on + strand, within HSERO_RS16215 at 3698.550 kb on - strand at 3698.600 kb on - strand at 3698.686 kb on + strand at 3698.741 kb on + strand, within HSERO_RS16220 at 3698.828 kb on + strand, within HSERO_RS16220 at 3698.834 kb on - strand, within HSERO_RS16220 at 3698.930 kb on + strand, within HSERO_RS16220 at 3698.938 kb on - strand, within HSERO_RS16220 at 3699.092 kb on + strand at 3699.259 kb on + strand, within HSERO_RS16225 at 3699.267 kb on - strand, within HSERO_RS16225 at 3699.269 kb on + strand, within HSERO_RS16225 at 3699.406 kb on + strand, within HSERO_RS16225 at 3699.809 kb on + strand, within HSERO_RS16225 at 3699.837 kb on + strand, within HSERO_RS16225 at 3699.924 kb on + strand, within HSERO_RS16225 at 3700.018 kb on - strand, within HSERO_RS16225
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 3,697,806 - +0.1 3,698,156 + HSERO_RS16215 0.38 -0.3 3,698,247 + HSERO_RS16215 0.50 -0.6 3,698,407 + -1.1 3,698,512 + HSERO_RS16215 0.85 +0.2 3,698,514 + HSERO_RS16215 0.85 +0.3 3,698,550 - -1.4 3,698,600 - -0.7 3,698,686 + +1.5 3,698,741 + HSERO_RS16220 0.22 +1.4 3,698,828 + HSERO_RS16220 0.40 +0.4 3,698,834 - HSERO_RS16220 0.42 +1.0 3,698,930 + HSERO_RS16220 0.62 +0.8 3,698,938 - HSERO_RS16220 0.64 +0.4 3,699,092 + -0.2 3,699,259 + HSERO_RS16225 0.11 +0.4 3,699,267 - HSERO_RS16225 0.11 +0.6 3,699,269 + HSERO_RS16225 0.11 -0.0 3,699,406 + HSERO_RS16225 0.22 -0.3 3,699,809 + HSERO_RS16225 0.52 -0.6 3,699,837 + HSERO_RS16225 0.54 +0.1 3,699,924 + HSERO_RS16225 0.61 -0.1 3,700,018 - HSERO_RS16225 0.68 -0.1
Or see this region's nucleotide sequence