Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS15930

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,634,526	+		HSERO_RS15925	0.25	+0.3
3,634,534	-		HSERO_RS15925	0.26	-2.5
3,634,554	-		HSERO_RS15925	0.28	+0.4
3,634,602	+		HSERO_RS15925	0.32	+1.0
3,634,731	+		HSERO_RS15925	0.42	+0.3
3,634,780	-		HSERO_RS15925	0.47	-0.0
3,635,131	+		HSERO_RS15925	0.76	+0.1
3,635,134	-		HSERO_RS15925	0.76	-0.2
3,635,139	-		HSERO_RS15925	0.76	+0.4
3,635,184	-		HSERO_RS15925	0.80	+0.3
3,635,390	+				+0.0
3,635,416	+				-1.0
3,635,479	+				-0.6
3,635,837	+		HSERO_RS15930	0.29	+0.4
3,635,962	-		HSERO_RS15930	0.38	+0.9
3,635,979	-				+0.4
3,636,028	-		HSERO_RS15930	0.43	-0.7
3,636,049	+		HSERO_RS15930	0.44	+0.8
3,636,057	-		HSERO_RS15930	0.45	+1.7
3,636,074	-		HSERO_RS15930	0.46	-0.1
3,636,074	-		HSERO_RS15930	0.46	-2.5
3,636,295	+		HSERO_RS15930	0.62	-1.5
3,636,443	-		HSERO_RS15930	0.72	-0.9
3,636,571	-		HSERO_RS15930	0.81	-2.4
3,636,578	-		HSERO_RS15930	0.82	+0.8
3,636,742	-				+1.0
3,636,999	-		HSERO_RS15935	0.15	+0.4
3,637,042	-		HSERO_RS15935	0.20	-2.7
3,637,042	-		HSERO_RS15935	0.20	-0.3
3,637,073	+		HSERO_RS15935	0.24	-0.5
3,637,234	+		HSERO_RS15935	0.43	+0.3
3,637,345	+		HSERO_RS15935	0.56	+0.5
3,637,365	+		HSERO_RS15935	0.58	+1.6
3,637,471	-		HSERO_RS15935	0.71	-0.8
3,637,557	-		HSERO_RS15935	0.81	-1.0
3,637,663	+				+0.1
3,637,757	-				-0.2