Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS15685

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,584,002	-		HSERO_RS15680	0.72	+0.8
3,584,026	+		HSERO_RS15680	0.74	-0.4
3,584,119	-		HSERO_RS15680	0.80	+0.2
3,584,252	+				-1.8
3,584,621	+				-0.8
3,584,691	+		HSERO_RS15685	0.12	+0.3
3,584,781	-		HSERO_RS15685	0.21	+0.9
3,584,848	-		HSERO_RS15685	0.27	-0.2
3,584,894	+		HSERO_RS15685	0.31	+0.9
3,584,948	-		HSERO_RS15685	0.36	+2.0
3,584,959	+		HSERO_RS15685	0.37	+0.2
3,584,985	+		HSERO_RS15685	0.40	+0.5
3,585,122	-		HSERO_RS15685	0.53	+0.3
3,585,161	-		HSERO_RS15685	0.56	+0.1
3,585,250	-		HSERO_RS15685	0.65	+0.4
3,585,252	+		HSERO_RS15685	0.65	+1.3
3,585,260	-		HSERO_RS15685	0.65	+0.6
3,585,324	+		HSERO_RS15685	0.71	+0.8
3,585,737	+				+0.2
3,585,745	-				-0.2