Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS15620

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,567,705	+		HSERO_RS15615	0.29	-0.3
3,567,739	+				+0.5
3,567,739	+		HSERO_RS15615	0.33	+0.1
3,567,774	+		HSERO_RS15615	0.38	+0.0
3,567,820	-		HSERO_RS15615	0.44	-1.0
3,567,937	+		HSERO_RS15615	0.59	-0.6
3,567,942	-		HSERO_RS15615	0.60	+0.4
3,568,194	+				+0.0
3,568,215	-				+0.1
3,568,253	+				+0.6
3,568,601	+				-0.1
3,568,609	-				+0.3
3,568,834	+		HSERO_RS15620	0.34	+0.1
3,568,853	+		HSERO_RS15620	0.37	+1.3
3,568,876	+		HSERO_RS15620	0.41	+0.8
3,568,944	+		HSERO_RS15620	0.53	+0.6
3,568,944	+		HSERO_RS15620	0.53	+1.8
3,569,011	+		HSERO_RS15620	0.65	-0.2
3,569,239	+				+0.1
3,569,403	+				-0.3
3,569,538	+				+0.0
3,569,602	-				+0.8
3,569,662	+				+0.7
3,569,820	-				-1.8
3,569,827	+		HSERO_RS15625	0.26	+0.3
3,569,958	+		HSERO_RS15625	0.49	+1.2
3,570,040	+		HSERO_RS15625	0.63	+0.1
3,570,042	+		HSERO_RS15625	0.64	+1.4
3,570,082	+		HSERO_RS15625	0.71	-0.2