Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS14540

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,293,923	-		HSERO_RS14535	0.72	+0.3
3,293,985	-		HSERO_RS14535	0.74	+0.3
3,294,172	+		HSERO_RS14535	0.81	+0.4
3,294,180	-		HSERO_RS14535	0.82	-0.5
3,294,211	+		HSERO_RS14535	0.83	-0.8
3,294,352	+		HSERO_RS14535	0.88	+0.3
3,294,648	-				+0.4
3,294,698	+				-0.1
3,294,785	+				+1.0
3,295,019	-		HSERO_RS14540	0.60	+1.0
3,295,064	+		HSERO_RS14540	0.72	+0.3
3,295,203	+				-0.3
3,295,266	+				-0.8
3,295,407	+		HSERO_RS14545	0.20	+0.3
3,295,476	-		HSERO_RS14545	0.25	-1.4
3,295,476	-		HSERO_RS14545	0.25	-0.3
3,295,479	+		HSERO_RS14545	0.26	+0.9
3,295,536	+		HSERO_RS14545	0.30	-0.0
3,295,652	-		HSERO_RS14545	0.40	+0.2
3,295,729	+		HSERO_RS14545	0.46	-0.3
3,295,784	+		HSERO_RS14545	0.51	+1.2
3,295,790	+		HSERO_RS14545	0.51	-0.3
3,295,930	+		HSERO_RS14545	0.63	-0.1
3,295,943	+		HSERO_RS14545	0.64	+0.1
3,296,010	-		HSERO_RS14545	0.69	-0.3
3,296,088	-		HSERO_RS14545	0.76	+0.8