Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS14455

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,273,079	+		HSERO_RS14450	0.41	+0.9
3,273,240	-		HSERO_RS14450	0.53	+0.1
3,273,357	-		HSERO_RS14450	0.62	+0.2
3,273,374	-		HSERO_RS14450	0.63	+0.3
3,273,419	+		HSERO_RS14450	0.66	+0.2
3,273,509	+		HSERO_RS14450	0.73	+0.0
3,273,511	-		HSERO_RS14450	0.73	+0.0
3,273,540	-		HSERO_RS14450	0.75	+0.1
3,273,568	-		HSERO_RS14450	0.77	+0.2
3,273,583	-		HSERO_RS14450	0.78	-0.1
3,273,689	+		HSERO_RS14450	0.86	+1.1
3,273,697	-		HSERO_RS14450	0.87	+0.2
3,273,797	+				+0.4
3,273,867	+				+0.4
3,274,055	-				-0.6
3,274,055	-				+0.3
3,274,121	-		HSERO_RS14455	0.12	-0.2
3,274,229	+		HSERO_RS14455	0.16	+0.0
3,274,242	-		HSERO_RS14455	0.17	-2.1
3,274,331	+		HSERO_RS14455	0.21	+0.3
3,274,436	+		HSERO_RS14455	0.26	-0.4
3,274,491	-		HSERO_RS14455	0.28	+0.1
3,274,546	-		HSERO_RS14455	0.31	-0.7
3,275,155	-		HSERO_RS14455	0.59	+1.4
3,275,310	-		HSERO_RS14455	0.66	-0.4
3,275,407	+		HSERO_RS14455	0.70	+0.0
3,275,677	+		HSERO_RS14455	0.83	-2.1
3,275,758	+		HSERO_RS14455	0.87	+0.3
3,275,762	+		HSERO_RS14455	0.87	-0.3
3,275,766	-		HSERO_RS14455	0.87	-0.8
3,275,773	+		HSERO_RS14455	0.87	+0.0
3,275,997	+				+0.4
3,276,076	+				-0.0
3,276,180	+				+0.1
3,276,263	+				+0.3
3,276,293	+				+0.6
3,276,371	-				+0.0
3,276,523	-		HSERO_RS14460	0.13	-0.7
3,276,736	-		HSERO_RS14460	0.20	-0.2
3,276,931	+		HSERO_RS14460	0.27	-0.5
3,276,948	-		HSERO_RS14460	0.28	-0.3