Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS13800

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,137,121	-		HSERO_RS13795	0.63	+0.0
3,137,244	+		HSERO_RS13795	0.70	-0.4
3,137,278	-		HSERO_RS13795	0.71	-0.1
3,137,353	+		HSERO_RS13795	0.75	+1.4
3,137,476	-		HSERO_RS13795	0.82	-0.3
3,137,624	+		HSERO_RS13795	0.89	-0.0
3,137,624	+		HSERO_RS13795	0.89	-1.6
3,137,632	-		HSERO_RS13795	0.90	-0.3
3,137,704	+				-0.3
3,137,855	+				-0.1
3,137,891	+				+0.3
3,137,950	-				+0.2
3,138,398	-		HSERO_RS13800	0.44	-0.7
3,138,441	+		HSERO_RS13800	0.48	+2.7
3,138,754	+		HSERO_RS13800	0.74	+0.4
3,138,772	-		HSERO_RS13800	0.75	+1.3
3,138,817	-		HSERO_RS13800	0.79	-0.3
3,138,859	+		HSERO_RS13800	0.82	-2.1
3,138,923	+		HSERO_RS13800	0.87	+0.5
3,138,962	-				-0.0
3,139,352	-		HSERO_RS13805	0.24	+0.8
3,139,597	-		HSERO_RS13805	0.45	-0.5
3,139,658	+		HSERO_RS13805	0.50	+0.7
3,139,658	-		HSERO_RS13805	0.50	-0.5
3,139,918	+		HSERO_RS13805	0.72	-0.4
3,139,999	+		HSERO_RS13805	0.79	+0.1
3,140,064	+		HSERO_RS13805	0.84	-0.0