Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS13335

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,038,772	-				-0.9
3,038,959	+				-0.1
3,038,967	-				-0.1
3,038,967	-				-0.0
3,038,967	-				-0.0
3,039,280	+		HSERO_RS13330	0.45	+0.2
3,039,314	-		HSERO_RS13330	0.52	-0.2
3,039,326	-		HSERO_RS13330	0.54	-0.4
3,039,355	+		HSERO_RS13330	0.59	+1.0
3,039,355	+		HSERO_RS13330	0.59	+1.1
3,039,550	+				-0.2
3,039,596	+				-1.7
3,039,639	+				-0.2
3,039,639	+				+1.3
3,039,647	-				-0.3
3,039,647	-				+0.1
3,039,812	-				+0.1
3,040,030	+		HSERO_RS13335	0.44	+1.1
3,040,163	-		HSERO_RS13335	0.64	+0.4
3,040,496	+				-0.3
3,040,595	+				-0.2
3,040,821	+		HSERO_RS13340	0.83	+0.1
3,040,835	-				-1.3
3,040,891	+		HSERO_RS13345	0.13	+1.5
3,041,384	+				+0.3