Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS13185

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
3,002,357	-				-0.9
3,002,494	+		HSERO_RS13180	0.35	-0.4
3,002,502	-		HSERO_RS13180	0.35	-0.3
3,002,644	-		HSERO_RS13180	0.47	-0.0
3,002,680	+		HSERO_RS13180	0.50	-0.2
3,002,680	+		HSERO_RS13180	0.50	+0.4
3,002,764	-		HSERO_RS13180	0.57	+0.4
3,002,794	+		HSERO_RS13180	0.60	+0.6
3,002,794	+		HSERO_RS13180	0.60	+0.1
3,002,964	+		HSERO_RS13180	0.74	+0.6
3,003,042	+		HSERO_RS13180	0.80	+0.1
3,003,111	+		HSERO_RS13180	0.86	+0.0
3,003,187	-				-0.5
3,003,453	-		HSERO_RS13185	0.14	-0.2
3,003,453	-		HSERO_RS13185	0.14	+0.4
3,003,602	+		HSERO_RS13185	0.30	+0.9
3,003,701	-		HSERO_RS13185	0.41	+1.4
3,003,823	-		HSERO_RS13185	0.54	+1.0
3,003,929	+		HSERO_RS13185	0.66	+1.6
3,003,977	+		HSERO_RS13185	0.71	+0.7
3,003,997	-		HSERO_RS13185	0.73	-0.1
3,004,146	-		HSERO_RS13185	0.89	-0.8
3,004,257	+				-0.6
3,004,470	-				+0.3
3,004,601	-				-1.1
3,004,876	-		HSERO_RS13190	0.27	-0.1
3,005,073	+		HSERO_RS13190	0.43	+0.3
3,005,176	+		HSERO_RS13190	0.51	+1.3