Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12920

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,944,924	-				-0.6
2,944,924	-				-0.5
2,945,074	+				+1.1
2,945,778	-				-0.1
2,946,150	+		HSERO_RS12920	0.25	+0.6
2,946,198	+		HSERO_RS12920	0.29	+0.7
2,947,553	-		HSERO_RS12925	0.21	+0.9
2,947,694	+		HSERO_RS12925	0.49	-0.9
2,947,715	+				-0.5
2,947,785	-		HSERO_RS12925	0.67	-0.3
2,947,786	-		HSERO_RS12925	0.68	+1.5
2,947,838	-		HSERO_RS12925	0.78	-1.5
2,947,915	+				+0.8
2,947,969	-				-0.1
2,947,969	-				+0.2