Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12220

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,774,634	-				-0.1
2,774,881	+		HSERO_RS12215	0.12	+0.1
2,774,996	+		HSERO_RS12215	0.28	-0.1
2,775,074	+		HSERO_RS12215	0.39	+0.6
2,776,155	-		HSERO_RS12220	0.83	+0.5
2,776,383	+				-0.8
2,776,521	+		HSERO_RS12225	0.15	+0.3
2,776,642	+		HSERO_RS12225	0.28	+0.1
2,776,661	+		HSERO_RS12225	0.30	-0.1
2,776,842	-		HSERO_RS12225	0.50	-0.3
2,777,047	-		HSERO_RS12225	0.72	-0.8
2,777,047	-		HSERO_RS12225	0.72	+0.4
2,777,139	+		HSERO_RS12225	0.82	+0.5
2,777,162	+		HSERO_RS12225	0.85	-0.1