Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12140

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,757,693	+		HSERO_RS12135	0.11	+0.1
2,757,761	-		HSERO_RS12135	0.18	+0.5
2,757,929	-		HSERO_RS12135	0.37	+0.4
2,758,215	+		HSERO_RS12135	0.68	+2.0
2,758,410	-		HSERO_RS12135	0.89	+0.0
2,758,410	-		HSERO_RS12135	0.89	-0.0
2,758,745	+		HSERO_RS12140	0.30	+1.8
2,759,026	-		HSERO_RS12140	0.65	+0.2
2,759,075	+		HSERO_RS12140	0.71	-1.0
2,759,190	-				+1.6
2,759,322	+				-0.3
2,759,359	-		HSERO_RS12145	0.19	+0.3
2,759,403	-		HSERO_RS12145	0.32	-0.6
2,759,430	-		HSERO_RS12145	0.41	-0.4
2,759,581	+		HSERO_RS12145	0.88	-0.8
2,759,814	-				-0.1
2,760,116	+		HSERO_RS12150	0.13	-0.1
2,760,173	+		HSERO_RS12150	0.18	+0.2