Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS12010

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,730,619	+				-0.2
2,730,663	+				+1.1
2,730,952	-		HSERO_RS12005	0.39	+0.1
2,731,071	+		HSERO_RS12005	0.58	+0.3
2,731,200	+		HSERO_RS12005	0.80	+0.4
2,731,319	+				+0.5
2,731,359	-				-0.2
2,731,364	-				-0.4
2,731,627	+		HSERO_RS12010	0.57	+0.5
2,731,676	-		HSERO_RS12010	0.69	+0.5
2,731,818	+				+0.0
2,731,841	-				+0.3
2,731,841	-				+1.9
2,731,841	-				+0.9
2,731,925	-				+0.7
2,732,044	-				-1.4
2,732,068	-		HSERO_RS12015	0.12	-0.3
2,732,457	-				+0.2
2,732,480	-				+0.5
2,732,501	-				-0.6
2,732,537	-				+0.6
2,732,563	+				-0.0
2,732,630	-		HSERO_RS12020	0.13	-0.7
2,732,711	+		HSERO_RS12020	0.18	+1.3