Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS11845

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,699,999	+				-0.1
2,700,086	+				-0.1
2,700,363	-		HSERO_RS11840	0.42	-1.6
2,700,420	+		HSERO_RS11840	0.49	+0.2
2,700,448	+		HSERO_RS11840	0.53	-0.6
2,700,527	-		HSERO_RS11840	0.63	-0.3
2,700,542	-		HSERO_RS11840	0.65	-0.6
2,700,737	+				-0.5
2,700,743	+				+0.4
2,700,743	+				+0.2
2,700,748	+				+0.2
2,700,751	-				+0.1
2,700,763	+				+0.7
2,700,811	+				+0.6
2,700,819	-				+0.4
2,700,851	-				+1.6
2,701,213	+		HSERO_RS11845	0.71	+2.9
2,701,234	+		HSERO_RS11845	0.77	+0.6
2,701,310	-				+0.7
2,701,375	-				+1.2
2,701,612	+		HSERO_RS11850	0.55	+0.8
2,701,642	-		HSERO_RS11850	0.65	+0.0
2,701,847	+		HSERO_RS11855	0.39	+0.4
2,702,048	+				+0.5
2,702,056	-				-0.1
2,702,094	+				-0.8