Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS11800

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,694,509	+		HSERO_RS11795	0.58	+1.1
2,694,547	-		HSERO_RS11795	0.60	+0.4
2,694,557	-		HSERO_RS11795	0.61	-0.6
2,694,588	+		HSERO_RS11795	0.63	+0.6
2,694,596	-		HSERO_RS11795	0.63	+0.3
2,694,613	+		HSERO_RS11795	0.64	+1.1
2,694,677	+		HSERO_RS11795	0.68	-0.1
2,694,728	+		HSERO_RS11795	0.71	+0.4
2,694,733	+		HSERO_RS11795	0.72	+0.6
2,694,908	+				+0.3
2,695,136	+				-1.5
2,695,147	+				-0.8
2,695,147	+				+0.2
2,695,378	-				+0.6
2,695,394	-				-0.8
2,695,625	+		HSERO_RS11800	0.36	+0.7
2,695,759	+		HSERO_RS11800	0.75	+0.1
2,695,768	-		HSERO_RS11800	0.78	+0.8
2,696,005	-		HSERO_RS11805	0.23	-0.2
2,696,082	-		HSERO_RS11805	0.50	+0.2
2,696,143	-		HSERO_RS11805	0.71	-0.0
2,696,170	+		HSERO_RS11805	0.81	-3.0
2,696,433	+		HSERO_RS11810	0.45	-0.5
2,696,446	-		HSERO_RS11810	0.48	-0.2
2,696,462	-		HSERO_RS11810	0.52	+0.2
2,696,553	-				+0.6
2,696,555	+		HSERO_RS11810	0.76	+2.3
2,696,592	+		HSERO_RS11810	0.86	-0.0
2,696,600	-		HSERO_RS11810	0.88	+0.2
2,696,632	-				+1.0
2,696,649	-				+0.1
2,696,656	-				-0.6
2,696,698	+				+0.5
2,696,698	+				-1.0
2,696,698	+				-0.1
2,696,698	+				+0.5
2,696,706	-		HSERO_RS11815	0.11	+1.6
2,696,706	-		HSERO_RS11815	0.11	+0.6