Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS11465

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,589,330	-				-0.1
2,589,330	-				-0.5
2,589,361	+				-1.7
2,589,408	+				+0.4
2,589,482	-				-0.6
2,589,565	+				+0.3
2,589,610	-				+0.3
2,589,733	+		HSERO_RS11460	0.37	-0.4
2,590,068	+				+0.4
2,590,086	-				+0.7
2,590,155	-				+0.1
2,590,165	-				-0.0
2,590,226	+				-0.1
2,590,793	+		HSERO_RS11465	0.46	-0.2
2,590,883	-		HSERO_RS11465	0.53	-2.0
2,590,893	+		HSERO_RS11465	0.54	-0.9
2,591,585	-				-0.3
2,591,749	-				+0.1
2,592,184	+		HSERO_RS11475	0.34	-0.2