Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09750

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,209,400	+				+0.7
2,209,438	+				-1.1
2,209,472	+				-2.3
2,209,638	+		HSERO_RS09745	0.26	-0.8
2,210,025	+		HSERO_RS09745	0.81	+0.2
2,210,213	-				+0.2
2,210,494	-		HSERO_RS09750	0.13	+0.9
2,210,689	+		HSERO_RS09750	0.29	-0.2
2,210,975	+		HSERO_RS09750	0.51	+0.8
2,211,050	-		HSERO_RS09750	0.57	+0.6
2,211,078	+		HSERO_RS09750	0.59	+1.3
2,211,436	+		HSERO_RS09750	0.88	+0.3
2,211,710	+				-0.7
2,211,897	+		HSERO_RS09755	0.21	-0.3
2,212,049	+		HSERO_RS09755	0.35	-0.7
2,212,082	-		HSERO_RS09755	0.38	-0.3
2,212,116	+		HSERO_RS09755	0.41	+1.5
2,212,284	+		HSERO_RS09755	0.56	+0.5
2,212,396	-		HSERO_RS09755	0.66	-0.3
2,212,436	+		HSERO_RS09755	0.69	-0.7