Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09465

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,151,742	+		HSERO_RS09455	0.89	+0.7
2,151,822	-				+0.1
2,152,787	-				-0.4
2,152,828	+				-0.9
2,152,980	+		HSERO_RS09465	0.16	-1.9
2,153,039	+		HSERO_RS09465	0.20	-1.3
2,153,181	-		HSERO_RS09465	0.29	+0.3
2,153,382	-		HSERO_RS09465	0.42	-1.9
2,153,502	+		HSERO_RS09465	0.50	-2.3
2,153,517	+		HSERO_RS09465	0.51	-1.1
2,153,517	+		HSERO_RS09465	0.51	-2.9
2,153,525	-		HSERO_RS09465	0.52	-0.5
2,153,635	+		HSERO_RS09465	0.59	-1.2
2,153,636	+		HSERO_RS09465	0.59	-1.5
2,153,723	+		HSERO_RS09465	0.65	-1.3
2,153,797	+		HSERO_RS09465	0.70	-0.9
2,153,805	-		HSERO_RS09465	0.70	-0.5
2,153,834	-		HSERO_RS09465	0.72	-1.4
2,154,101	-		HSERO_RS09465	0.90	-1.7
2,154,228	+				-1.8
2,154,228	+				-0.4
2,154,365	+				-1.0
2,154,479	+		HSERO_RS09470	0.31	+0.3
2,154,508	-		HSERO_RS09470	0.39	-1.0
2,154,675	+		HSERO_RS09470	0.83	-0.3
2,154,815	+				-1.0
2,154,955	+		HSERO_RS09475	0.12	-1.7
2,155,074	-		HSERO_RS09475	0.17	-0.1
2,155,187	-		HSERO_RS09475	0.23	-1.3
2,155,234	-		HSERO_RS09475	0.25	+0.3