Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09220

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,097,748	-				+2.3
2,097,856	+				-0.2
2,097,923	-		HSERO_RS09215	0.15	-0.0
2,097,945	-		HSERO_RS09215	0.17	+1.4
2,098,173	+		HSERO_RS09215	0.44	-0.6
2,098,527	-		HSERO_RS09215	0.86	-0.3
2,098,748	-				-0.7
2,098,795	-		HSERO_RS09220	0.11	+1.6
2,098,795	-		HSERO_RS09220	0.11	-0.2
2,099,321	+		HSERO_RS09225	0.24	+0.0
2,099,322	+		HSERO_RS09225	0.24	-0.1
2,099,329	-		HSERO_RS09225	0.26	-0.7
2,099,329	-				+1.5
2,099,390	-		HSERO_RS09225	0.39	+0.5
2,099,532	-		HSERO_RS09225	0.69	+0.2
2,099,532	-		HSERO_RS09225	0.69	+0.3
2,099,613	+		HSERO_RS09225	0.86	-0.2
2,099,632	-				+0.1
2,099,659	+				-1.3
2,099,659	+				+0.1
2,099,711	-				+0.6
2,099,725	+				-0.1
2,099,849	-		HSERO_RS09230	0.16	-1.6
2,099,875	+		HSERO_RS09230	0.19	+0.3
2,099,926	-		HSERO_RS09230	0.25	-1.6
2,099,944	+		HSERO_RS09230	0.27	+1.3