Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09205

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,094,909	+				-0.0
2,095,201	+		HSERO_RS09200	0.34	+0.4
2,095,201	+				-1.0
2,095,209	-		HSERO_RS09200	0.35	+0.0
2,095,209	-		HSERO_RS09200	0.35	-1.1
2,095,209	-		HSERO_RS09200	0.35	+0.5
2,095,617	+		HSERO_RS09200	0.80	-0.5
2,095,790	-				-0.5
2,095,793	+				+0.2
2,096,555	+		HSERO_RS09205	0.79	+0.5
2,096,558	-		HSERO_RS09205	0.79	+1.0
2,096,747	-				+0.5
2,096,866	-		HSERO_RS09210	0.11	-0.3
2,096,866	-		HSERO_RS09210	0.11	+0.0
2,096,876	-		HSERO_RS09210	0.12	-0.2
2,097,010	+		HSERO_RS09210	0.25	-0.2
2,097,278	+		HSERO_RS09210	0.51	-0.8
2,097,286	-		HSERO_RS09210	0.52	-0.3
2,097,286	-		HSERO_RS09210	0.52	+0.8
2,097,286	-		HSERO_RS09210	0.52	+0.4
2,097,288	+		HSERO_RS09210	0.52	+0.9
2,097,288	+		HSERO_RS09210	0.52	-0.1
2,097,288	+		HSERO_RS09210	0.52	+1.1
2,097,296	-		HSERO_RS09210	0.53	-1.6
2,097,296	-		HSERO_RS09210	0.53	+0.6
2,097,298	+		HSERO_RS09210	0.53	+0.2
2,097,547	-				-0.0
2,097,659	-		HSERO_RS09210	0.89	-0.5