Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS09010

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
2,035,674	+		HSERO_RS09005	0.48	+0.1
2,035,675	-		HSERO_RS09005	0.48	+0.9
2,036,103	+		HSERO_RS09005	0.79	+1.3
2,036,498	-				-0.2
2,036,574	-				-1.2
2,036,661	+				+0.3
2,036,662	-				+0.7
2,036,691	-		HSERO_RS09010	0.11	+0.8
2,036,706	+		HSERO_RS09010	0.12	+0.5
2,036,809	+				-0.0
2,036,876	+		HSERO_RS09010	0.22	+1.0
2,037,155	-		HSERO_RS09010	0.39	+1.0
2,037,235	-		HSERO_RS09010	0.43	+0.8
2,037,406	-		HSERO_RS09010	0.54	+0.5
2,037,524	-		HSERO_RS09010	0.61	+0.0
2,037,645	-		HSERO_RS09010	0.68	+0.3
2,037,738	-		HSERO_RS09010	0.74	-0.5
2,037,886	+		HSERO_RS09010	0.83	+1.8
2,038,843	-		HSERO_RS09015	0.37	+0.9
2,038,875	-				-0.4
2,039,036	-		HSERO_RS09015	0.48	-0.7
2,039,094	+		HSERO_RS09015	0.52	-0.2