Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS08460 and HSERO_RS08465 are separated by 11 nucleotides HSERO_RS08465 and HSERO_RS08470 are separated by 7 nucleotides HSERO_RS08470 and HSERO_RS08475 overlap by 4 nucleotides HSERO_RS08475 and HSERO_RS08480 overlap by 4 nucleotides
HSERO_RS08460: HSERO_RS08460 - chemotaxis protein CheY, at 1,926,122 to 1,927,183
_RS08460
HSERO_RS08465: HSERO_RS08465 - hypothetical protein, at 1,927,195 to 1,927,812
_RS08465
HSERO_RS08470: HSERO_RS08470 - chemotaxis protein, at 1,927,820 to 1,928,662
_RS08470
HSERO_RS08475: HSERO_RS08475 - chemotaxis protein CheY, at 1,928,659 to 1,929,030
_RS08475
HSERO_RS08480: HSERO_RS08480 - chemotaxis protein CheA, at 1,929,027 to 1,931,540
_RS08480
Position (kb) 1927
1928
1929 Strain fitness (log2 ratio) -1
0
1 at 1926.942 kb on + strand, within HSERO_RS08460 at 1926.955 kb on - strand, within HSERO_RS08460 at 1926.995 kb on + strand, within HSERO_RS08460 at 1927.119 kb on + strand at 1927.203 kb on + strand at 1927.715 kb on + strand at 1927.729 kb on - strand, within HSERO_RS08465 at 1927.729 kb on - strand, within HSERO_RS08465 at 1927.917 kb on - strand, within HSERO_RS08470 at 1928.077 kb on + strand, within HSERO_RS08470 at 1928.135 kb on + strand, within HSERO_RS08470 at 1928.154 kb on - strand, within HSERO_RS08470 at 1928.187 kb on - strand, within HSERO_RS08470 at 1928.270 kb on - strand, within HSERO_RS08470 at 1928.336 kb on - strand, within HSERO_RS08470 at 1928.553 kb on + strand, within HSERO_RS08470 at 1928.610 kb on - strand at 1928.914 kb on + strand, within HSERO_RS08475 at 1928.952 kb on + strand, within HSERO_RS08475 at 1929.020 kb on - strand at 1929.169 kb on - strand at 1929.326 kb on + strand, within HSERO_RS08480 at 1929.425 kb on - strand, within HSERO_RS08480 at 1929.425 kb on - strand, within HSERO_RS08480 at 1929.427 kb on - strand, within HSERO_RS08480 at 1929.459 kb on + strand, within HSERO_RS08480 at 1929.560 kb on + strand, within HSERO_RS08480
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 1,926,942 + HSERO_RS08460 0.77 +1.0 1,926,955 - HSERO_RS08460 0.78 -0.4 1,926,995 + HSERO_RS08460 0.82 +0.6 1,927,119 + +0.7 1,927,203 + -0.2 1,927,715 + +0.8 1,927,729 - HSERO_RS08465 0.86 +0.3 1,927,729 - HSERO_RS08465 0.86 +1.0 1,927,917 - HSERO_RS08470 0.12 +1.1 1,928,077 + HSERO_RS08470 0.30 +0.1 1,928,135 + HSERO_RS08470 0.37 +0.3 1,928,154 - HSERO_RS08470 0.40 +0.5 1,928,187 - HSERO_RS08470 0.44 -0.2 1,928,270 - HSERO_RS08470 0.53 -0.0 1,928,336 - HSERO_RS08470 0.61 +1.5 1,928,553 + HSERO_RS08470 0.87 -0.1 1,928,610 - -0.4 1,928,914 + HSERO_RS08475 0.69 +0.0 1,928,952 + HSERO_RS08475 0.79 -0.8 1,929,020 - +0.2 1,929,169 - +0.4 1,929,326 + HSERO_RS08480 0.12 -1.2 1,929,425 - HSERO_RS08480 0.16 -0.1 1,929,425 - HSERO_RS08480 0.16 +1.3 1,929,427 - HSERO_RS08480 0.16 +0.8 1,929,459 + HSERO_RS08480 0.17 +0.9 1,929,560 + HSERO_RS08480 0.21 +0.0
Or see this region's nucleotide sequence