Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS08465

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,926,198	-				+2.0
1,926,276	-		HSERO_RS08460	0.15	+1.1
1,926,560	-		HSERO_RS08460	0.41	+0.4
1,926,584	-		HSERO_RS08460	0.44	-0.0
1,926,682	-		HSERO_RS08460	0.53	-0.8
1,926,715	+		HSERO_RS08460	0.56	-2.9
1,926,715	+		HSERO_RS08460	0.56	+0.2
1,926,715	+		HSERO_RS08460	0.56	-0.5
1,926,715	+		HSERO_RS08460	0.56	+0.6
1,926,788	-		HSERO_RS08460	0.63	-0.7
1,926,805	+		HSERO_RS08460	0.64	-0.5
1,926,942	+		HSERO_RS08460	0.77	+1.0
1,926,955	-		HSERO_RS08460	0.78	-0.4
1,926,995	+		HSERO_RS08460	0.82	+0.6
1,927,119	+				+0.7
1,927,203	+				-0.2
1,927,715	+				+0.8
1,927,729	-		HSERO_RS08465	0.86	+0.3
1,927,729	-		HSERO_RS08465	0.86	+1.0
1,927,917	-		HSERO_RS08470	0.12	+1.1
1,928,077	+		HSERO_RS08470	0.30	+0.1
1,928,135	+		HSERO_RS08470	0.37	+0.3
1,928,154	-		HSERO_RS08470	0.40	+0.5
1,928,187	-		HSERO_RS08470	0.44	-0.2
1,928,270	-		HSERO_RS08470	0.53	-0.0
1,928,336	-		HSERO_RS08470	0.61	+1.5
1,928,553	+		HSERO_RS08470	0.87	-0.1
1,928,610	-				-0.4