Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS08395 and HSERO_RS08400 are separated by 58 nucleotides HSERO_RS08400 and HSERO_RS08405 are separated by 125 nucleotides HSERO_RS08405 and HSERO_RS08410 are separated by 745 nucleotides
HSERO_RS08395: HSERO_RS08395 - 2-aminoadipate aminotransferase, at 1,912,130 to 1,913,572
_RS08395
HSERO_RS08400: HSERO_RS08400 - glutathione S-transferase, at 1,913,631 to 1,914,302
_RS08400
HSERO_RS08405: HSERO_RS08405 - membrane protein, at 1,914,428 to 1,915,756
_RS08405
HSERO_RS08410: HSERO_RS08410 - hypothetical protein, at 1,916,502 to 1,916,930
_RS08410
Position (kb) 1914
1915
1916 Strain fitness (log2 ratio) -1
0
1
2 at 1913.591 kb on + strand at 1913.752 kb on + strand, within HSERO_RS08400 at 1913.770 kb on - strand, within HSERO_RS08400 at 1913.833 kb on - strand, within HSERO_RS08400 at 1913.847 kb on - strand, within HSERO_RS08400 at 1913.987 kb on + strand, within HSERO_RS08400 at 1914.121 kb on - strand, within HSERO_RS08400 at 1914.158 kb on - strand, within HSERO_RS08400 at 1914.205 kb on - strand, within HSERO_RS08400 at 1914.288 kb on + strand at 1914.841 kb on + strand, within HSERO_RS08405 at 1915.116 kb on + strand, within HSERO_RS08405 at 1915.823 kb on + strand at 1915.984 kb on + strand at 1916.016 kb on + strand at 1916.297 kb on - strand at 1916.558 kb on - strand, within HSERO_RS08410 at 1916.728 kb on + strand, within HSERO_RS08410
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 1,913,591 + -0.3 1,913,752 + HSERO_RS08400 0.18 -0.1 1,913,770 - HSERO_RS08400 0.21 +0.8 1,913,833 - HSERO_RS08400 0.30 -0.3 1,913,847 - HSERO_RS08400 0.32 +0.0 1,913,987 + HSERO_RS08400 0.53 +1.0 1,914,121 - HSERO_RS08400 0.73 +0.5 1,914,158 - HSERO_RS08400 0.78 +0.6 1,914,205 - HSERO_RS08400 0.85 +0.2 1,914,288 + +1.0 1,914,841 + HSERO_RS08405 0.31 +1.8 1,915,116 + HSERO_RS08405 0.52 +0.8 1,915,823 + +0.3 1,915,984 + -0.7 1,916,016 + -0.9 1,916,297 - +0.4 1,916,558 - HSERO_RS08410 0.13 +0.6 1,916,728 + HSERO_RS08410 0.53 -0.2
Or see this region's nucleotide sequence