Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS08080

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,845,571	+		HSERO_RS08070	0.84	+0.4
1,845,595	+		HSERO_RS08070	0.88	+0.3
1,845,926	-		HSERO_RS08075	0.35	+0.9
1,846,628	-				+0.4
1,846,926	-		HSERO_RS08080	0.33	+0.5
1,847,006	-		HSERO_RS08080	0.39	+2.0
1,847,040	+		HSERO_RS08080	0.42	+2.1
1,847,048	-		HSERO_RS08080	0.42	+0.6
1,847,433	+		HSERO_RS08080	0.74	+0.1
1,847,460	-		HSERO_RS08080	0.76	+1.1
1,847,568	+		HSERO_RS08080	0.85	+0.6
1,847,576	-		HSERO_RS08080	0.85	-0.5
1,847,614	+		HSERO_RS08080	0.88	+0.9
1,847,622	-		HSERO_RS08080	0.89	+0.2
1,847,688	+				-2.0
1,847,702	-				+0.0
1,847,785	+				+0.2
1,847,921	-				-0.8
1,847,992	-				-0.2
1,848,002	-				+0.3
1,848,002	-				-0.1
1,848,002	-				-1.0