Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt HSERO_RS07460 and HSERO_RS07465 are separated by 33 nucleotides HSERO_RS07465 and HSERO_RS07470 are separated by 45 nucleotides HSERO_RS07470 and HSERO_RS07475 are separated by 116 nucleotides HSERO_RS07475 and HSERO_RS07480 overlap by 4 nucleotides
HSERO_RS07460: HSERO_RS07460 - hypothetical protein, at 1,707,810 to 1,708,133
_RS07460
HSERO_RS07465: HSERO_RS07465 - alpha/beta hydrolase, at 1,708,167 to 1,708,979
_RS07465
HSERO_RS07470: HSERO_RS07470 - ketosteroid isomerase, at 1,709,025 to 1,709,588
_RS07470
HSERO_RS07475: HSERO_RS07475 - nitrate ABC transporter permease, at 1,709,705 to 1,710,523
_RS07475
HSERO_RS07480: HSERO_RS07480 - nitrate ABC transporter ATP-binding protein, at 1,710,520 to 1,711,317
_RS07480
Position (kb) 1709
1710 Strain fitness (log2 ratio) -1
0
1 at 1708.196 kb on - strand at 1708.196 kb on - strand at 1708.366 kb on - strand, within HSERO_RS07465 at 1708.426 kb on - strand, within HSERO_RS07465 at 1708.496 kb on + strand, within HSERO_RS07465 at 1708.896 kb on + strand, within HSERO_RS07465 at 1708.901 kb on + strand at 1708.989 kb on - strand at 1709.431 kb on - strand, within HSERO_RS07470 at 1709.704 kb on + strand at 1709.769 kb on + strand at 1709.806 kb on - strand, within HSERO_RS07475 at 1709.837 kb on - strand, within HSERO_RS07475 at 1709.856 kb on - strand, within HSERO_RS07475 at 1709.948 kb on - strand, within HSERO_RS07475 at 1709.968 kb on - strand, within HSERO_RS07475 at 1710.069 kb on + strand, within HSERO_RS07475 at 1710.082 kb on + strand, within HSERO_RS07475 at 1710.087 kb on + strand, within HSERO_RS07475 at 1710.338 kb on - strand, within HSERO_RS07475 at 1710.576 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Carbon source Deoxyribonucleic from herring sperm 5 mg/mL remove 1,708,196 - +0.0 1,708,196 - +0.5 1,708,366 - HSERO_RS07465 0.24 +0.4 1,708,426 - HSERO_RS07465 0.32 -0.1 1,708,496 + HSERO_RS07465 0.40 -0.2 1,708,896 + HSERO_RS07465 0.90 +0.0 1,708,901 + +0.5 1,708,989 - +0.1 1,709,431 - HSERO_RS07470 0.72 +1.0 1,709,704 + +0.1 1,709,769 + -0.1 1,709,806 - HSERO_RS07475 0.12 +0.4 1,709,837 - HSERO_RS07475 0.16 +0.8 1,709,856 - HSERO_RS07475 0.18 +0.5 1,709,948 - HSERO_RS07475 0.30 +0.4 1,709,968 - HSERO_RS07475 0.32 +0.4 1,710,069 + HSERO_RS07475 0.44 +0.1 1,710,082 + HSERO_RS07475 0.46 -0.2 1,710,087 + HSERO_RS07475 0.47 -0.1 1,710,338 - HSERO_RS07475 0.77 +0.6 1,710,576 - -0.1
Or see this region's nucleotide sequence