Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS07320
Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Carbon source Deoxyribonucleic from herring sperm 5 mg/mL |
---|---|---|---|---|---|
remove | |||||
1,679,020 | - | +0.3 | |||
1,679,067 | - | +0.0 | |||
1,679,264 | + | HSERO_RS07320 | 0.24 | +0.5 | |
1,679,657 | - | +0.5 | |||
1,679,732 | + | -0.8 | |||
1,679,839 | + | -0.5 | |||
1,679,899 | + | -0.3 | |||
1,679,992 | - | HSERO_RS07325 | 0.16 | +0.3 | |
1,680,008 | + | HSERO_RS07325 | 0.17 | +0.1 | |
1,680,093 | - | HSERO_RS07325 | 0.22 | +0.1 |
Or see this region's nucleotide sequence