Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS07260

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,660,735	-		HSERO_RS07255	0.41	-0.5
1,660,834	-		HSERO_RS07255	0.51	+0.2
1,661,322	+				+0.5
1,661,330	-				-1.6
1,661,422	-				-0.2
1,661,576	+				-0.5
1,661,658	-				+0.4
1,661,707	-				-0.8
1,661,739	-				-0.4
1,662,198	-		HSERO_RS07260	0.49	+0.4
1,662,247	+		HSERO_RS07260	0.54	+0.6
1,662,576	-		HSERO_RS07260	0.85	+1.6
1,662,636	-				+0.7
1,662,889	-				-0.1
1,663,033	+				+0.2
1,663,098	+				+0.5
1,663,106	-				-0.5
1,663,123	-				+0.4
1,663,157	+				+0.4
1,663,157	+				-0.4
1,663,157	+				+0.4
1,663,227	+				-0.5
1,663,314	+				+0.6
1,663,550	-		HSERO_RS07265	0.32	+0.3
1,663,600	+		HSERO_RS07265	0.38	+0.6
1,663,600	+		HSERO_RS07265	0.38	-0.0