Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS07250

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,658,902	+		HSERO_RS07245	0.66	+0.1
1,658,915	-		HSERO_RS07245	0.66	+1.4
1,658,975	+		HSERO_RS07245	0.69	+0.4
1,659,247	-		HSERO_RS07245	0.81	+0.1
1,659,257	-		HSERO_RS07245	0.81	+0.3
1,659,323	+		HSERO_RS07245	0.84	+0.4
1,659,367	-		HSERO_RS07245	0.86	+0.8
1,659,514	+				-2.2
1,659,577	-				+0.6
1,659,697	-				+0.9
1,659,697	-				+0.4
1,659,697	-				+0.4
1,659,697	-				-1.5
1,659,697	-				+0.7
1,660,047	-		HSERO_RS07250	0.68	+1.2
1,660,117	+		HSERO_RS07250	0.89	-0.1
1,660,129	+				-0.0
1,660,319	-				-0.2
1,660,617	+		HSERO_RS07255	0.30	-1.8
1,660,625	-		HSERO_RS07255	0.31	+0.8
1,660,735	-		HSERO_RS07255	0.41	-0.5
1,660,834	-		HSERO_RS07255	0.51	+0.2