Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS06880

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,565,256	+				+0.4
1,565,297	-		HSERO_RS06875	0.14	-0.5
1,565,330	-		HSERO_RS06875	0.17	-0.1
1,565,469	-		HSERO_RS06875	0.32	-0.0
1,565,469	-		HSERO_RS06875	0.32	+1.3
1,565,572	-		HSERO_RS06875	0.43	+0.1
1,565,572	-		HSERO_RS06875	0.43	-0.1
1,565,618	+		HSERO_RS06875	0.48	-0.8
1,565,623	+		HSERO_RS06875	0.48	-0.5
1,565,707	-		HSERO_RS06875	0.57	+1.4
1,565,894	+		HSERO_RS06875	0.77	-0.2
1,566,168	+				-0.5
1,566,176	-				+0.4
1,566,310	+		HSERO_RS06880	0.17	+0.3
1,566,310	+		HSERO_RS06880	0.17	+1.0
1,566,493	-		HSERO_RS06880	0.43	+0.6
1,566,625	-				-0.2
1,566,766	+		HSERO_RS06880	0.81	+0.9
1,567,793	+				-0.2