Strain Fitness in Herbaspirillum seropedicae SmR1 around HSERO_RS06600

Experiment: Carbon source Deoxyribonucleic from herring sperm 5 mg/mL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Carbon source Deoxyribonucleic from herring sperm 5 mg/mL
1,500,227	-		HSERO_RS06590	0.89	-0.3
1,500,274	+				-1.5
1,500,360	+				+0.1
1,500,633	-		HSERO_RS06595	0.14	+0.0
1,500,832	+		HSERO_RS06595	0.62	-0.6
1,500,832	+		HSERO_RS06595	0.62	+0.4
1,500,832	+		HSERO_RS06595	0.62	+0.0
1,500,837	+		HSERO_RS06595	0.64	+1.5
1,500,981	-				-0.8
1,501,128	-				-1.0
1,501,190	+				+0.2
1,501,275	-		HSERO_RS06600	0.16	+0.4
1,501,291	+		HSERO_RS06600	0.19	+1.0
1,501,705	+		HSERO_RS06600	0.84	+0.2
1,501,847	+				-0.1
1,501,982	-				-0.1
1,502,088	-		HSERO_RS06605	0.44	-0.9
1,502,112	-		HSERO_RS06605	0.48	-0.0
1,502,115	+		HSERO_RS06605	0.48	+0.0
1,502,125	+		HSERO_RS06605	0.50	-0.2
1,502,133	+		HSERO_RS06605	0.51	-0.2
1,502,193	-		HSERO_RS06605	0.61	+0.4
1,502,275	+		HSERO_RS06605	0.74	-1.1
1,502,290	-		HSERO_RS06605	0.77	-0.6
1,502,456	-				+1.2
1,502,502	-				-0.8
1,502,508	-		HSERO_RS06610	0.10	-0.5
1,502,617	-		HSERO_RS06610	0.24	-0.1